Protein–RNA interactions for Protein: Q96KF2

PRAC1, Small nuclear protein PRAC1, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1Q96KF2 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PRAC1Q96KF2 SLC16A6-205ENST00000620436 2055 ntTSL 5 BASIC6.69□□□□□ -1.34
PRAC1Q96KF2 EFCAB13-201ENST00000331493 3931 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
PRAC1Q96KF2 LINC01447-201ENST00000429010 2761 ntTSL 2 BASIC6.69□□□□□ -1.34
PRAC1Q96KF2 GAL3ST4-203ENST00000413800 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 TRAP1-212ENST00000575671 2309 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 MYH2-202ENST00000397183 6078 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 AL132656.4-201ENST00000623504 2122 ntBASIC6.68□□□□□ -1.34
PRAC1Q96KF2 ASAH1-202ENST00000314146 1690 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 Z98259.1-201ENST00000564261 1697 ntBASIC6.68□□□□□ -1.34
PRAC1Q96KF2 AC245140.2-201ENST00000624054 1939 ntBASIC6.68□□□□□ -1.34
PRAC1Q96KF2 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 MLC1-202ENST00000395876 3601 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 CTAGE7P-201ENST00000435712 2436 ntBASIC6.68□□□□□ -1.34
PRAC1Q96KF2 AC034229.3-201ENST00000606203 2436 ntBASIC6.68□□□□□ -1.34
PRAC1Q96KF2 TMC3-201ENST00000359440 4641 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 SCFD2-202ENST00000401642 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 ITGA7-206ENST00000553804 3935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 SGK3-202ENST00000396596 4190 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 STOML3-202ENST00000423210 1997 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 CAVIN2-201ENST00000304141 3229 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 DDX11-201ENST00000228264 3717 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 FAM193A-202ENST00000382839 4710 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 AC024568.1-201ENST00000517330 2260 ntBASIC6.68□□□□□ -1.34
PRAC1Q96KF2 GPAA1P2-202ENST00000606848 1787 ntBASIC6.68□□□□□ -1.34
PRAC1Q96KF2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 SLC7A5P2-201ENST00000553010 536 ntBASIC6.68□□□□□ -1.34
PRAC1Q96KF2 MIR3665-201ENST00000578708 105 ntBASIC6.68□□□□□ -1.34
PRAC1Q96KF2 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 AC099654.11-201ENST00000638857 294 ntBASIC6.68□□□□□ -1.34
PRAC1Q96KF2 SEMA4G-202ENST00000370250 3596 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 ESR1-202ENST00000338799 3335 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 TRIM29-201ENST00000341846 3328 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 SLC43A3-201ENST00000352187 2595 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 OR13A1-201ENST00000374401 2574 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 DCLK3-203ENST00000636136 5446 ntTSL 5 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 WNT3-201ENST00000225512 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 APOBEC3B-203ENST00000402182 1844 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 FCGR3A-202ENST00000367969 2385 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 PDZRN3-203ENST00000462146 2927 ntTSL 2 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 UGT1A9-201ENST00000354728 2416 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 AL359845.1-201ENST00000458202 1648 ntBASIC6.68□□□□□ -1.34
PRAC1Q96KF2 VPS11-207ENST00000620429 2739 ntTSL 5 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 TNIK-211ENST00000475336 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 AC091167.3-201ENST00000561573 3838 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 ANXA4-201ENST00000394295 2799 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 FCRL3-201ENST00000368184 4725 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 LY9-205ENST00000392203 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 SUCLG2-AS1-202ENST00000482677 2226 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 PLAT-204ENST00000429710 1655 ntTSL 2 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 BRD7-201ENST00000394688 5370 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRAC1Q96KF2 ZWILCH-201ENST00000307897 3960 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PRAC1Q96KF2 MRS2-204ENST00000443868 3980 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
PRAC1Q96KF2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC6.67□□□□□ -1.34
PRAC1Q96KF2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
PRAC1Q96KF2 PACSIN1-206ENST00000538621 4286 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PRAC1Q96KF2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PRAC1Q96KF2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PRAC1Q96KF2 CRISPLD2-201ENST00000262424 4586 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PRAC1Q96KF2 VIPAS39-211ENST00000557658 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PRAC1Q96KF2 MARK2P9-201ENST00000430958 1727 ntBASIC6.67□□□□□ -1.34
PRAC1Q96KF2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PRAC1Q96KF2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PRAC1Q96KF2 YME1L1-207ENST00000477432 3474 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PRAC1Q96KF2 ATP1A3-209ENST00000602133 3458 ntTSL 2 BASIC6.67□□□□□ -1.34
PRAC1Q96KF2 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PRAC1Q96KF2 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PRAC1Q96KF2 CCDC170-201ENST00000239374 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms