RNA–Protein interactions for RNA: ENST00000338799.9

ESR1-202, Transcript of estrogen receptor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ESR1, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESR1-202ENST00000338799 NISCHQ9Y2I1 1504 aa21.89■■□□□ 1.09
ESR1-202ENST00000338799 DCAF8L2P0C7V8 631 aa19.39■□□□□ 0.69
ESR1-202ENST00000338799 SHROOM4Q9ULL8 1493 aa19.2■□□□□ 0.66
ESR1-202ENST00000338799 CCDC180Q9P1Z9 1646 aa18.79■□□□□ 0.6
ESR1-202ENST00000338799 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
ESR1-202ENST00000338799 ZCCHC6Q5VYS8 1495 aaKnown RBP18.33■□□□□ 0.53
ESR1-202ENST00000338799 ABCC9O60706 1549 aa18.26■□□□□ 0.51
ESR1-202ENST00000338799 CHIC1Q5VXU3 224 aa17.95■□□□□ 0.46
ESR1-202ENST00000338799 PCGF6Q9BYE7 350 aa17.9■□□□□ 0.46
ESR1-202ENST00000338799 PPARGC1BQ86YN6 1023 aaKnown RBP17.84■□□□□ 0.45
ESR1-202ENST00000338799 MYO15BQ96JP2 1530 aa17.83■□□□□ 0.45
ESR1-202ENST00000338799 SCRIBQ14160 1630 aa17.82■□□□□ 0.44
ESR1-202ENST00000338799 HRCP23327 699 aa17.78■□□□□ 0.44
ESR1-202ENST00000338799 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
ESR1-202ENST00000338799 LOC105371045A0A1W2PR82 267 aa17.67■□□□□ 0.42
ESR1-202ENST00000338799 PABPN1Q86U42 306 aaKnown RBP eCLIP17.62■□□□□ 0.41
ESR1-202ENST00000338799 NACADO15069 1562 aa17.61■□□□□ 0.41
ESR1-202ENST00000338799 EHMT2Q96KQ7 1210 aa17.6■□□□□ 0.41
ESR1-202ENST00000338799 RB1CC1Q8TDY2 1594 aa17.54■□□□□ 0.4
ESR1-202ENST00000338799 FAM9AQ8IZU1 332 aaPredicted RBP17.43■□□□□ 0.38
ESR1-202ENST00000338799 CECR2Q9BXF3 1484 aa17.35■□□□□ 0.37
ESR1-202ENST00000338799 RSF1Q96T23 1441 aaPredicted RBP17.3■□□□□ 0.36
ESR1-202ENST00000338799 TRIM26Q12899 539 aaPredicted RBP17.25■□□□□ 0.35
ESR1-202ENST00000338799 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
ESR1-202ENST00000338799 MROH2BQ7Z745 1585 aa17.13■□□□□ 0.33
ESR1-202ENST00000338799 UNC13AQ9UPW8 1703 aa17.13■□□□□ 0.33
ESR1-202ENST00000338799 WIZO95785 1651 aa17.02■□□□□ 0.31
ESR1-202ENST00000338799 PELP1Q8IZL8 1130 aaKnown RBP17.01■□□□□ 0.31
ESR1-202ENST00000338799 BICRAQ9NZM4 1560 aa17.01■□□□□ 0.31
ESR1-202ENST00000338799 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
ESR1-202ENST00000338799 ZEB1P37275 1124 aaPredicted RBP16.9■□□□□ 0.3
ESR1-202ENST00000338799 TTBK1Q5TCY1 1321 aaPredicted RBP16.9■□□□□ 0.3
ESR1-202ENST00000338799 BAZ1AQ9NRL2 1556 aaPredicted RBP16.84■□□□□ 0.29
ESR1-202ENST00000338799 RANGAP1P46060 587 aaPredicted RBP16.8■□□□□ 0.28
ESR1-202ENST00000338799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.75■□□□□ 0.27
ESR1-202ENST00000338799 SMARCA4P51532 1647 aa16.73■□□□□ 0.27
ESR1-202ENST00000338799 CCER1Q8TC90 406 aaPredicted RBP16.72■□□□□ 0.27
ESR1-202ENST00000338799 CCDC88BA6NC98 1476 aa16.69■□□□□ 0.26
ESR1-202ENST00000338799 ABCC8Q09428 1581 aa16.65■□□□□ 0.26
ESR1-202ENST00000338799 UBTFP17480 764 aaKnown RBP16.63■□□□□ 0.25
ESR1-202ENST00000338799 TOP2AP11388 1531 aaKnown RBP16.57■□□□□ 0.24
ESR1-202ENST00000338799 BAZ1BQ9UIG0 1483 aaKnown RBP16.56■□□□□ 0.24
ESR1-202ENST00000338799 NEUROD1Q13562 356 aa16.55■□□□□ 0.24
ESR1-202ENST00000338799 GTF3C3Q9Y5Q9 886 aa16.55■□□□□ 0.24
ESR1-202ENST00000338799 EIF4G1Q04637 1599 aaKnown RBP16.54■□□□□ 0.24
ESR1-202ENST00000338799 ATAD2BQ9ULI0 1458 aa16.51■□□□□ 0.23
ESR1-202ENST00000338799 SMARCA2P51531 1590 aa16.5■□□□□ 0.23
ESR1-202ENST00000338799 YTHDC1Q96MU7 727 aaKnown RBP16.46■□□□□ 0.23
ESR1-202ENST00000338799 SOGA1O94964 1423 aa16.45■□□□□ 0.22
ESR1-202ENST00000338799 ACIN1Q9UKV3 1341 aaKnown RBP16.42■□□□□ 0.22
ESR1-202ENST00000338799 DIEXFQ68CQ4 756 aaKnown RBP16.42■□□□□ 0.22
ESR1-202ENST00000338799 CSRNP3Q8WYN3 585 aa16.39■□□□□ 0.21
ESR1-202ENST00000338799 RUSC2Q8N2Y8 1516 aa16.39■□□□□ 0.21
ESR1-202ENST00000338799 CC2D2AQ9P2K1 1620 aa16.38■□□□□ 0.21
ESR1-202ENST00000338799 WRNQ14191 1432 aaPredicted RBP eCLIP16.36■□□□□ 0.21
ESR1-202ENST00000338799 DNAJC5BQ9UF47 199 aa16.35■□□□□ 0.21
ESR1-202ENST00000338799 PEG3Q9GZU2 1588 aa16.31■□□□□ 0.2
ESR1-202ENST00000338799 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
ESR1-202ENST00000338799 CENPBP07199 599 aaPredicted RBP16.3■□□□□ 0.2
ESR1-202ENST00000338799 NCAPD3P42695 1498 aa16.27■□□□□ 0.2
ESR1-202ENST00000338799 CEP162Q5TB80 1403 aa16.27■□□□□ 0.19
ESR1-202ENST00000338799 MYT1Q01538 1121 aa16.25■□□□□ 0.19
ESR1-202ENST00000338799 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
ESR1-202ENST00000338799 ATP1B4Q9UN42 357 aaPredicted RBP16.17■□□□□ 0.18
ESR1-202ENST00000338799 APLP2Q06481 763 aa16.16■□□□□ 0.18
ESR1-202ENST00000338799 ZNF316A6NFI3 1004 aaPredicted RBP16.15■□□□□ 0.18
ESR1-202ENST00000338799 SYNJ1O43426 1573 aa16.15■□□□□ 0.18
ESR1-202ENST00000338799 TNIKQ9UKE5 1360 aa16.12■□□□□ 0.17
ESR1-202ENST00000338799 P3H3Q8IVL6 736 aa16.09■□□□□ 0.17
ESR1-202ENST00000338799 MIER1Q8N108 512 aa16.04■□□□□ 0.16
ESR1-202ENST00000338799 NESP48681 1621 aa16.04■□□□□ 0.16
ESR1-202ENST00000338799 CADPSQ9ULU8 1353 aa16.01■□□□□ 0.15
ESR1-202ENST00000338799 GOLGA3Q08378 1498 aa16.01■□□□□ 0.15
ESR1-202ENST00000338799 RAPGEF2Q9Y4G8 1499 aa16■□□□□ 0.15
ESR1-202ENST00000338799 ITGAEP38570 1179 aa15.98■□□□□ 0.15
ESR1-202ENST00000338799 CLIP1P30622 1438 aa15.96■□□□□ 0.15
ESR1-202ENST00000338799 EEA1Q15075 1411 aa15.96■□□□□ 0.15
ESR1-202ENST00000338799 CFTRP13569 1480 aa15.94■□□□□ 0.14
ESR1-202ENST00000338799 CUX2O14529 1486 aa15.93■□□□□ 0.14
ESR1-202ENST00000338799 CUX1P39880 1505 aa15.93■□□□□ 0.14
ESR1-202ENST00000338799 CEP164Q9UPV0 1460 aa15.93■□□□□ 0.14
ESR1-202ENST00000338799 KIF27Q86VH2 1401 aa15.9■□□□□ 0.14
ESR1-202ENST00000338799 FANCD2Q9BXW9 1451 aa15.88■□□□□ 0.13
ESR1-202ENST00000338799 ARID3CA6NKF2 412 aa15.86■□□□□ 0.13
ESR1-202ENST00000338799 RAD54L2Q9Y4B4 1467 aa15.85■□□□□ 0.13
ESR1-202ENST00000338799 TOP2BQ02880 1626 aa15.85■□□□□ 0.13
ESR1-202ENST00000338799 TDRD9Q8NDG6 1382 aaKnown RBP15.84■□□□□ 0.13
ESR1-202ENST00000338799 FGD5Q6ZNL6 1462 aa15.82■□□□□ 0.12
ESR1-202ENST00000338799 VPS8Q8N3P4 1428 aa15.79■□□□□ 0.12
ESR1-202ENST00000338799 FBLN2P98095 1184 aa15.79■□□□□ 0.12
ESR1-202ENST00000338799 CARMIL1Q5VZK9 1371 aa15.77■□□□□ 0.12
ESR1-202ENST00000338799 KANK4Q5T7N3 995 aaPredicted RBP15.77■□□□□ 0.11
ESR1-202ENST00000338799 LAMC3Q9Y6N6 1575 aa15.76■□□□□ 0.11
ESR1-202ENST00000338799 BCL11AQ9H165 835 aa15.74■□□□□ 0.11
ESR1-202ENST00000338799 IGF1RP08069 1367 aa15.74■□□□□ 0.11
ESR1-202ENST00000338799 BCANQ96GW7 911 aa15.72■□□□□ 0.11
ESR1-202ENST00000338799 BIVM-ERCC5R4GMW8 1640 aa15.68■□□□□ 0.1
ESR1-202ENST00000338799 FAM50AQ14320 339 aaKnown RBP15.68■□□□□ 0.1
ESR1-202ENST00000338799 PDS5BQ9NTI5 1447 aa15.68■□□□□ 0.1
ESR1-202ENST00000338799 KIF21BO75037 1637 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms