RNA–Protein interactions for RNA: ENST00000538621.2

PACSIN1-206, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN1, Length 4,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-206ENST00000538621 NISCHQ9Y2I1 1504 aa20.43■□□□□ 0.86
PACSIN1-206ENST00000538621 DCAF8L2P0C7V8 631 aa19.27■□□□□ 0.68
PACSIN1-206ENST00000538621 SUPT5HO00267 1087 aaKnown RBP18.82■□□□□ 0.6
PACSIN1-206ENST00000538621 SHROOM4Q9ULL8 1493 aa18.76■□□□□ 0.59
PACSIN1-206ENST00000538621 EHMT2Q96KQ7 1210 aa18.05■□□□□ 0.48
PACSIN1-206ENST00000538621 PELP1Q8IZL8 1130 aaKnown RBP17.89■□□□□ 0.46
PACSIN1-206ENST00000538621 MYT1Q01538 1121 aa17.78■□□□□ 0.44
PACSIN1-206ENST00000538621 PCGF6Q9BYE7 350 aa17.71■□□□□ 0.43
PACSIN1-206ENST00000538621 FAM9AQ8IZU1 332 aaPredicted RBP17.67■□□□□ 0.42
PACSIN1-206ENST00000538621 TTBK1Q5TCY1 1321 aaPredicted RBP17.42■□□□□ 0.38
PACSIN1-206ENST00000538621 TRIM41Q8WV44 630 aa17.27■□□□□ 0.36
PACSIN1-206ENST00000538621 ABCC9O60706 1549 aa17.24■□□□□ 0.35
PACSIN1-206ENST00000538621 CHIC1Q5VXU3 224 aa17.21■□□□□ 0.35
PACSIN1-206ENST00000538621 LOC105371045A0A1W2PR82 267 aa17.2■□□□□ 0.34
PACSIN1-206ENST00000538621 PPARGC1BQ86YN6 1023 aaKnown RBP17.15■□□□□ 0.34
PACSIN1-206ENST00000538621 RANGAP1P46060 587 aaPredicted RBP17.08■□□□□ 0.32
PACSIN1-206ENST00000538621 ZCCHC6Q5VYS8 1495 aaKnown RBP17.04■□□□□ 0.32
PACSIN1-206ENST00000538621 HRCP23327 699 aa17■□□□□ 0.31
PACSIN1-206ENST00000538621 APLP2Q06481 763 aa16.95■□□□□ 0.3
PACSIN1-206ENST00000538621 CCDC180Q9P1Z9 1646 aa16.95■□□□□ 0.3
PACSIN1-206ENST00000538621 CCER1Q8TC90 406 aaPredicted RBP16.94■□□□□ 0.3
PACSIN1-206ENST00000538621 PABPN1Q86U42 306 aaKnown RBP eCLIP16.87■□□□□ 0.29
PACSIN1-206ENST00000538621 UBTFP17480 764 aaKnown RBP16.86■□□□□ 0.29
PACSIN1-206ENST00000538621 TRIM26Q12899 539 aaPredicted RBP16.86■□□□□ 0.29
PACSIN1-206ENST00000538621 ZEB1P37275 1124 aaPredicted RBP16.8■□□□□ 0.28
PACSIN1-206ENST00000538621 SCRIBQ14160 1630 aa16.72■□□□□ 0.27
PACSIN1-206ENST00000538621 YTHDC1Q96MU7 727 aaKnown RBP16.62■□□□□ 0.25
PACSIN1-206ENST00000538621 ATP1B4Q9UN42 357 aaPredicted RBP16.58■□□□□ 0.25
PACSIN1-206ENST00000538621 CENPBP07199 599 aaPredicted RBP16.56■□□□□ 0.24
PACSIN1-206ENST00000538621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
PACSIN1-206ENST00000538621 HNRNPUL2Q1KMD3 747 aaKnown RBP16.47■□□□□ 0.23
PACSIN1-206ENST00000538621 ITGAEP38570 1179 aa16.39■□□□□ 0.22
PACSIN1-206ENST00000538621 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
PACSIN1-206ENST00000538621 RSF1Q96T23 1441 aaPredicted RBP16.28■□□□□ 0.2
PACSIN1-206ENST00000538621 DCAF1Q9Y4B6 1507 aa16.25■□□□□ 0.19
PACSIN1-206ENST00000538621 DIEXFQ68CQ4 756 aaKnown RBP16.21■□□□□ 0.18
PACSIN1-206ENST00000538621 RB1CC1Q8TDY2 1594 aa16.19■□□□□ 0.18
PACSIN1-206ENST00000538621 NACADO15069 1562 aa16.19■□□□□ 0.18
PACSIN1-206ENST00000538621 CECR2Q9BXF3 1484 aa16.17■□□□□ 0.18
PACSIN1-206ENST00000538621 ERICH6Q7L0X2 663 aa16.12■□□□□ 0.17
PACSIN1-206ENST00000538621 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
PACSIN1-206ENST00000538621 GTF3C3Q9Y5Q9 886 aa15.98■□□□□ 0.15
PACSIN1-206ENST00000538621 CNGB1Q14028 1251 aaPredicted RBP15.96■□□□□ 0.14
PACSIN1-206ENST00000538621 NEFLP07196 543 aa15.95■□□□□ 0.14
PACSIN1-206ENST00000538621 MROH2BQ7Z745 1585 aa15.95■□□□□ 0.14
PACSIN1-206ENST00000538621 FAM50AQ14320 339 aaKnown RBP15.91■□□□□ 0.14
PACSIN1-206ENST00000538621 POLR3GLQ9BT43 218 aa15.87■□□□□ 0.13
PACSIN1-206ENST00000538621 NEUROD1Q13562 356 aa15.87■□□□□ 0.13
PACSIN1-206ENST00000538621 ZNF316A6NFI3 1004 aaPredicted RBP15.85■□□□□ 0.13
PACSIN1-206ENST00000538621 BAZ1AQ9NRL2 1556 aaPredicted RBP15.85■□□□□ 0.13
PACSIN1-206ENST00000538621 P3H3Q8IVL6 736 aa15.82■□□□□ 0.12
PACSIN1-206ENST00000538621 ACIN1Q9UKV3 1341 aaKnown RBP15.8■□□□□ 0.12
PACSIN1-206ENST00000538621 WIZO95785 1651 aa15.77■□□□□ 0.11
PACSIN1-206ENST00000538621 BCANQ96GW7 911 aa15.75■□□□□ 0.11
PACSIN1-206ENST00000538621 BAZ1BQ9UIG0 1483 aaKnown RBP15.75■□□□□ 0.11
PACSIN1-206ENST00000538621 SCAF1Q9H7N4 1312 aaKnown RBP15.7■□□□□ 0.1
PACSIN1-206ENST00000538621 CCDC88BA6NC98 1476 aa15.68■□□□□ 0.1
PACSIN1-206ENST00000538621 ARID3CA6NKF2 412 aa15.68■□□□□ 0.1
PACSIN1-206ENST00000538621 WRNQ14191 1432 aaPredicted RBP eCLIP15.67■□□□□ 0.1
PACSIN1-206ENST00000538621 ABCC8Q09428 1581 aa15.66■□□□□ 0.1
PACSIN1-206ENST00000538621 TRIM52Q96A61 297 aa15.65■□□□□ 0.1
PACSIN1-206ENST00000538621 FBLN2P98095 1184 aa15.63■□□□□ 0.09
PACSIN1-206ENST00000538621 SOGA1O94964 1423 aa15.62■□□□□ 0.09
PACSIN1-206ENST00000538621 CEP162Q5TB80 1403 aa15.58■□□□□ 0.08
PACSIN1-206ENST00000538621 BCL11AQ9H165 835 aa15.57■□□□□ 0.08
PACSIN1-206ENST00000538621 PRKCSHP14314 528 aaPredicted RBP15.56■□□□□ 0.08
PACSIN1-206ENST00000538621 MIER1Q8N108 512 aa15.55■□□□□ 0.08
PACSIN1-206ENST00000538621 ZNF326Q5BKZ1 582 aaKnown RBP15.53■□□□□ 0.08
PACSIN1-206ENST00000538621 CLIP1P30622 1438 aa15.51■□□□□ 0.07
PACSIN1-206ENST00000538621 MYT1LQ9UL68 1186 aa15.51■□□□□ 0.07
PACSIN1-206ENST00000538621 SMARCA4P51532 1647 aa15.51■□□□□ 0.07
PACSIN1-206ENST00000538621 TOP2AP11388 1531 aaKnown RBP15.5■□□□□ 0.07
PACSIN1-206ENST00000538621 ANP32CO43423 234 aa15.48■□□□□ 0.07
PACSIN1-206ENST00000538621 GOLGA3Q08378 1498 aa15.47■□□□□ 0.07
PACSIN1-206ENST00000538621 HIRIP3Q9BW71 556 aaPredicted RBP15.47■□□□□ 0.07
PACSIN1-206ENST00000538621 DDX10Q13206 875 aaKnown RBP15.46■□□□□ 0.07
PACSIN1-206ENST00000538621 EEA1Q15075 1411 aa15.45■□□□□ 0.06
PACSIN1-206ENST00000538621 ATAD2BQ9ULI0 1458 aa15.43■□□□□ 0.06
PACSIN1-206ENST00000538621 TNIKQ9UKE5 1360 aa15.42■□□□□ 0.06
PACSIN1-206ENST00000538621 SMARCA2P51531 1590 aa15.39■□□□□ 0.05
PACSIN1-206ENST00000538621 RUSC2Q8N2Y8 1516 aa15.37■□□□□ 0.05
PACSIN1-206ENST00000538621 CEP164Q9UPV0 1460 aa15.37■□□□□ 0.05
PACSIN1-206ENST00000538621 CHIC2Q9UKJ5 165 aa15.36■□□□□ 0.05
PACSIN1-206ENST00000538621 KIF27Q86VH2 1401 aa15.35■□□□□ 0.05
PACSIN1-206ENST00000538621 FKBP8Q14318 412 aa15.33■□□□□ 0.05
PACSIN1-206ENST00000538621 ZNF777Q9ULD5 760 aaPredicted RBP15.33■□□□□ 0.05
PACSIN1-206ENST00000538621 SLC24A1O60721 1099 aa15.32■□□□□ 0.04
PACSIN1-206ENST00000538621 TONSLQ96HA7 1378 aa15.29■□□□□ 0.04
PACSIN1-206ENST00000538621 CUX2O14529 1486 aa15.28■□□□□ 0.04
PACSIN1-206ENST00000538621 SLC4A1APQ9BWU0 796 aaKnown RBP15.27■□□□□ 0.04
PACSIN1-206ENST00000538621 HNRNPUQ00839 825 aaKnown RBP eCLIP15.24■□□□□ 0.03
PACSIN1-206ENST00000538621 FAM9BQ8IZU0 186 aa15.2■□□□□ 0.02
PACSIN1-206ENST00000538621 SIN3AQ96ST3 1273 aa15.2■□□□□ 0.02
PACSIN1-206ENST00000538621 CARMIL1Q5VZK9 1371 aa15.19■□□□□ 0.02
PACSIN1-206ENST00000538621 IRX6P78412 446 aaPredicted RBP15.19■□□□□ 0.02
PACSIN1-206ENST00000538621 CDK11AQ9UQ88 783 aaPredicted RBP15.19■□□□□ 0.02
PACSIN1-206ENST00000538621 RRP7BPQ9NSQ0 103 aa15.18■□□□□ 0.02
PACSIN1-206ENST00000538621 MTUS2Q5JR59 1369 aa15.18■□□□□ 0.02
PACSIN1-206ENST00000538621 RAPGEF2Q9Y4G8 1499 aa15.18■□□□□ 0.02
PACSIN1-206ENST00000538621 CHMP7Q8WUX9 453 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms