Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.35
APH1AQ96BI3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.9□□□□□ -0.35
APH1AQ96BI3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 AC136759.1-202ENST00000530858 2194 ntBASIC12.89□□□□□ -0.35
APH1AQ96BI3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 HLA-J-204ENST00000495278 958 ntBASIC12.89□□□□□ -0.35
APH1AQ96BI3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 SCARNA20.5-201ENST00000516991 142 ntBASIC12.89□□□□□ -0.35
APH1AQ96BI3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 AC138028.6-201ENST00000616106 1482 ntBASIC12.89□□□□□ -0.35
APH1AQ96BI3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
APH1AQ96BI3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APH1AQ96BI3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 MARK2P5-201ENST00000507649 634 ntBASIC12.88□□□□□ -0.35
APH1AQ96BI3 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 MIR3615-201ENST00000581999 87 ntBASIC12.88□□□□□ -0.35
APH1AQ96BI3 AL132994.2-201ENST00000603120 687 ntBASIC12.88□□□□□ -0.35
APH1AQ96BI3 MIR6787-201ENST00000616675 61 ntBASIC12.88□□□□□ -0.35
APH1AQ96BI3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 FAM90A7P-201ENST00000382628 1395 ntBASIC12.88□□□□□ -0.35
APH1AQ96BI3 FAM90A23P-201ENST00000400136 1395 ntBASIC12.88□□□□□ -0.35
APH1AQ96BI3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.88□□□□□ -0.35
APH1AQ96BI3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APH1AQ96BI3 AP001267.2-201ENST00000532619 2086 ntBASIC12.88□□□□□ -0.35
APH1AQ96BI3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms