Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 AC104073.2-201ENST00000453737 312 ntBASIC12.74□□□□□ -0.37
TMEM54Q969K7 KRT18P15-201ENST00000458108 1291 ntBASIC12.74□□□□□ -0.37
TMEM54Q969K7 AC126915.1-201ENST00000522847 1038 ntBASIC12.74□□□□□ -0.37
TMEM54Q969K7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 SNORD3B-2-202ENST00000571722 791 ntBASIC12.74□□□□□ -0.37
TMEM54Q969K7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 AC090164.2-201ENST00000611487 516 ntBASIC12.74□□□□□ -0.37
TMEM54Q969K7 BAP1-211ENST00000615113 489 ntBASIC12.74□□□□□ -0.37
TMEM54Q969K7 AL136295.7-201ENST00000619226 1200 ntBASIC12.74□□□□□ -0.37
TMEM54Q969K7 AC092299.1-201ENST00000632679 757 ntBASIC12.74□□□□□ -0.37
TMEM54Q969K7 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.74□□□□□ -0.37
TMEM54Q969K7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TMEM54Q969K7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TMEM54Q969K7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 BRWD1P1-201ENST00000401091 371 ntBASIC12.73□□□□□ -0.37
TMEM54Q969K7 MIR1908-201ENST00000410394 80 ntBASIC12.73□□□□□ -0.37
TMEM54Q969K7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 AC078875.1-201ENST00000431907 724 ntBASIC12.73□□□□□ -0.37
TMEM54Q969K7 AC092580.1-201ENST00000433998 658 ntBASIC12.73□□□□□ -0.37
TMEM54Q969K7 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 SERPINA13P-202ENST00000478994 924 ntBASIC12.73□□□□□ -0.37
TMEM54Q969K7 AC106794.1-201ENST00000506935 792 ntBASIC12.73□□□□□ -0.37
TMEM54Q969K7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 MIR6752-201ENST00000618442 71 ntBASIC12.73□□□□□ -0.37
TMEM54Q969K7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.73□□□□□ -0.37
TMEM54Q969K7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM54Q969K7 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms