Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-CQ95604 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-CQ95604 RHOC-205ENST00000369636 786 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-CQ95604 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
HLA-CQ95604 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-CQ95604 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-CQ95604 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-CQ95604 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
HLA-CQ95604 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC14.75□□□□□ -0.05
HLA-CQ95604 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC14.75□□□□□ -0.05
HLA-CQ95604 SAP18P2-201ENST00000434334 459 ntBASIC14.75□□□□□ -0.05
HLA-CQ95604 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-CQ95604 RPSAP70-201ENST00000504462 864 ntBASIC14.75□□□□□ -0.05
HLA-CQ95604 SLC25A15P3-201ENST00000505530 290 ntBASIC14.75□□□□□ -0.05
HLA-CQ95604 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-CQ95604 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.75□□□□□ -0.05
HLA-CQ95604 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-CQ95604 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-CQ95604 AC009118.3-201ENST00000622896 873 ntBASIC14.75□□□□□ -0.05
HLA-CQ95604 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC14.75□□□□□ -0.05
HLA-CQ95604 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-CQ95604 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-CQ95604 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HLA-CQ95604 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-CQ95604 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-CQ95604 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-CQ95604 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-CQ95604 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-CQ95604 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-CQ95604 AL513477.1-201ENST00000602865 2407 ntBASIC14.75□□□□□ -0.05
HLA-CQ95604 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-CQ95604 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-CQ95604 AC092850.2-201ENST00000623821 2697 ntBASIC14.75□□□□□ -0.05
HLA-CQ95604 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-CQ95604 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
HLA-CQ95604 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-CQ95604 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
HLA-CQ95604 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-CQ95604 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-CQ95604 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
HLA-CQ95604 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HLA-CQ95604 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
HLA-CQ95604 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.74□□□□□ -0.05
HLA-CQ95604 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-CQ95604 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.74□□□□□ -0.05
HLA-CQ95604 MROH4P-201ENST00000431302 1578 ntBASIC14.74□□□□□ -0.05
HLA-CQ95604 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.74□□□□□ -0.05
HLA-CQ95604 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HLA-CQ95604 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
HLA-CQ95604 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HLA-CQ95604 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 KRT18P44-201ENST00000416086 1285 ntBASIC14.74□□□□□ -0.05
HLA-CQ95604 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-CQ95604 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14.74□□□□□ -0.05
HLA-CQ95604 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.74□□□□□ -0.05
HLA-CQ95604 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-CQ95604 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC14.74□□□□□ -0.05
HLA-CQ95604 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-CQ95604 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.74□□□□□ -0.05
HLA-CQ95604 RN7SL838P-201ENST00000481676 295 ntBASIC14.74□□□□□ -0.05
HLA-CQ95604 GOLGA2P8-201ENST00000505201 779 ntBASIC14.74□□□□□ -0.05
HLA-CQ95604 TBC1D3P6-201ENST00000505954 962 ntBASIC14.74□□□□□ -0.05
HLA-CQ95604 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HLA-CQ95604 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC14.74□□□□□ -0.05
HLA-CQ95604 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-CQ95604 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-CQ95604 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 AL109620.1-201ENST00000618738 1197 ntBASIC14.74□□□□□ -0.05
HLA-CQ95604 AL050341.2-201ENST00000567508 1541 ntBASIC14.74□□□□□ -0.05
HLA-CQ95604 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-CQ95604 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HLA-CQ95604 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HLA-CQ95604 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 FAM226B-201ENST00000602508 1490 ntBASIC14.74□□□□□ -0.05
HLA-CQ95604 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HLA-CQ95604 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HLA-CQ95604 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms