Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.13□□□□□ -0.31
APH1BQ8WW43 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 PDIA3P1-201ENST00000471856 1510 ntBASIC13.13□□□□□ -0.31
APH1BQ8WW43 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.13□□□□□ -0.31
APH1BQ8WW43 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APH1BQ8WW43 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 AC010970.1-201ENST00000445125 1848 ntBASIC13.12□□□□□ -0.31
APH1BQ8WW43 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 ACTBP8-201ENST00000403258 1108 ntBASIC13.12□□□□□ -0.31
APH1BQ8WW43 CNN2P2-201ENST00000443536 909 ntBASIC13.12□□□□□ -0.31
APH1BQ8WW43 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 CNN2P3-201ENST00000450201 906 ntBASIC13.12□□□□□ -0.31
APH1BQ8WW43 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 AC005586.2-201ENST00000563946 837 ntBASIC13.12□□□□□ -0.31
APH1BQ8WW43 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 AL671883.3-201ENST00000603274 991 ntBASIC13.12□□□□□ -0.31
APH1BQ8WW43 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 AL136317.3-201ENST00000618497 906 ntBASIC13.12□□□□□ -0.31
APH1BQ8WW43 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 Z98257.2-202ENST00000641138 1548 ntBASIC13.12□□□□□ -0.31
APH1BQ8WW43 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 CLUHP2-201ENST00000426660 1303 ntBASIC13.12□□□□□ -0.31
APH1BQ8WW43 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.12□□□□□ -0.31
APH1BQ8WW43 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
APH1BQ8WW43 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1BQ8WW43 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1BQ8WW43 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.11□□□□□ -0.31
APH1BQ8WW43 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
APH1BQ8WW43 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1BQ8WW43 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1BQ8WW43 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.11□□□□□ -0.31
APH1BQ8WW43 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.11□□□□□ -0.31
APH1BQ8WW43 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.11□□□□□ -0.31
APH1BQ8WW43 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1BQ8WW43 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1BQ8WW43 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APH1BQ8WW43 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APH1BQ8WW43 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.11□□□□□ -0.31
APH1BQ8WW43 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1BQ8WW43 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APH1BQ8WW43 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
APH1BQ8WW43 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1BQ8WW43 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1BQ8WW43 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APH1BQ8WW43 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1BQ8WW43 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1BQ8WW43 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
APH1BQ8WW43 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.11□□□□□ -0.31
APH1BQ8WW43 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APH1BQ8WW43 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
APH1BQ8WW43 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms