Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 HSPA8P5-201ENST00000456928 2069 ntBASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP1Q8TDR0 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 AL136309.1-201ENST00000403917 691 ntBASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 MIR1202-201ENST00000408529 83 ntBASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 ARSEP1-201ENST00000420443 635 ntBASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 NME2P1-201ENST00000426182 414 ntBASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 AC011474.4-201ENST00000623523 2076 ntBASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 KRT8P28-201ENST00000433288 1390 ntBASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 KRT8P4-201ENST00000509735 1454 ntBASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 PCDHA5-203ENST00000614258 4248 ntBASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP1Q8TDR0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 AC009093.10-201ENST00000641956 1442 ntBASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 MEX3B-202ENST00000558133 4333 ntBASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 BEND3P1-201ENST00000421591 1944 ntBASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 AC027237.1-201ENST00000560942 655 ntBASIC15.18■□□□□ 0.02
TRAF3IP1Q8TDR0 AC073413.1-201ENST00000603927 732 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms