Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 AP005019.2-201ENST00000615104 511 ntBASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DNAAF1Q8NEP3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 Z82170.1-201ENST00000625081 3192 ntBASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 AL023775.1-201ENST00000454907 1746 ntBASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 ACKR1-201ENST00000368121 1240 ntBASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 AC087499.6-201ENST00000411576 835 ntBASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 KLF2P2-201ENST00000416807 1039 ntBASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 GNAQP1-201ENST00000444815 1067 ntBASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 AP001582.1-201ENST00000525856 295 ntBASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 ENPP7P5-201ENST00000541031 1031 ntBASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 AC092364.2-202ENST00000597012 1073 ntBASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 TMEM261P1-201ENST00000604899 340 ntBASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 AC006538.3-201ENST00000612495 578 ntBASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 AC090643.2-201ENST00000623442 2029 ntBASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
DNAAF1Q8NEP3 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms