Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MIR557-201ENST00000385239 98 ntBASIC16.15■□□□□ 0.18
TRIM50Q86XT4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 DUX4L50-201ENST00000455245 715 ntBASIC16.15■□□□□ 0.18
TRIM50Q86XT4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 MIR4522-201ENST00000584932 87 ntBASIC16.15■□□□□ 0.18
TRIM50Q86XT4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 YRDCP1-201ENST00000621419 643 ntBASIC16.15■□□□□ 0.18
TRIM50Q86XT4 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.14■□□□□ 0.18
TRIM50Q86XT4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.14■□□□□ 0.18
TRIM50Q86XT4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.14■□□□□ 0.18
TRIM50Q86XT4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRIM50Q86XT4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
TRIM50Q86XT4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
TRIM50Q86XT4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRIM50Q86XT4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.14■□□□□ 0.18
TRIM50Q86XT4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 AP000356.3-201ENST00000382243 753 ntBASIC16.14■□□□□ 0.17
TRIM50Q86XT4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 AC092580.1-201ENST00000433998 658 ntBASIC16.14■□□□□ 0.17
TRIM50Q86XT4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 KRT18P9-201ENST00000604826 1300 ntBASIC16.14■□□□□ 0.17
TRIM50Q86XT4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
TRIM50Q86XT4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 MYADML-201ENST00000474610 2147 ntBASIC16.13■□□□□ 0.17
TRIM50Q86XT4 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 AC215219.1-201ENST00000400706 1817 ntBASIC16.13■□□□□ 0.17
TRIM50Q86XT4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM50Q86XT4 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms