Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 AP000593.2-201ENST00000542775 1433 ntBASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 INE2-201ENST00000630399 1874 ntBASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 BCRP2-202ENST00000447763 634 ntBASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 BCRP6-201ENST00000510112 632 ntBASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 BCRP7-201ENST00000511549 544 ntBASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 AC025279.2-201ENST00000569730 653 ntBASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 AL359881.3-201ENST00000602640 1721 ntBASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 MEX3B-202ENST00000558133 4333 ntBASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST3H2AQ7L7L0 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 AC139712.1-201ENST00000378256 1875 ntBASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 AC016694.1-201ENST00000434179 700 ntBASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 TTTY23B-201ENST00000442790 549 ntBASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 PUDPP3-201ENST00000445368 636 ntBASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.31□□□□□ -0.28
HIST3H2AQ7L7L0 RN7SL692P-201ENST00000464677 288 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms