Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LPCAT4Q643R3 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
LPCAT4Q643R3 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13.71□□□□□ -0.22
LPCAT4Q643R3 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC13.71□□□□□ -0.22
LPCAT4Q643R3 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 AC003102.2-201ENST00000589195 1469 ntBASIC13.7□□□□□ -0.22
LPCAT4Q643R3 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 AC007969.1-201ENST00000433675 447 ntBASIC13.7□□□□□ -0.22
LPCAT4Q643R3 FAM58CP-201ENST00000435741 640 ntBASIC13.7□□□□□ -0.22
LPCAT4Q643R3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 ALG1L8P-201ENST00000533887 760 ntBASIC13.7□□□□□ -0.22
LPCAT4Q643R3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LPCAT4Q643R3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 AL353779.1-201ENST00000434793 351 ntBASIC13.69□□□□□ -0.22
LPCAT4Q643R3 AL592309.1-201ENST00000443127 649 ntBASIC13.69□□□□□ -0.22
LPCAT4Q643R3 RNA5SP416-201ENST00000516838 111 ntBASIC13.69□□□□□ -0.22
LPCAT4Q643R3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 KRT18P8-201ENST00000581937 1246 ntBASIC13.69□□□□□ -0.22
LPCAT4Q643R3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 AL033527.5-202ENST00000641632 1098 ntBASIC13.69□□□□□ -0.22
LPCAT4Q643R3 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.69□□□□□ -0.22
LPCAT4Q643R3 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms