Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 AL023775.1-201ENST00000454907 1746 ntBASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
HERC4Q5GLZ8 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 AC100850.1-201ENST00000506768 649 ntBASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 AC245884.6-201ENST00000515672 1067 ntBASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 SORD2P-201ENST00000558556 1069 ntBASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 CU633904.3-201ENST00000624042 1029 ntBASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HERC4Q5GLZ8 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HERC4Q5GLZ8 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HERC4Q5GLZ8 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HERC4Q5GLZ8 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HERC4Q5GLZ8 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.27■□□□□ 0.19
HERC4Q5GLZ8 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
HERC4Q5GLZ8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HERC4Q5GLZ8 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HERC4Q5GLZ8 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HERC4Q5GLZ8 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HERC4Q5GLZ8 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
HERC4Q5GLZ8 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
HERC4Q5GLZ8 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HERC4Q5GLZ8 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 E2F3P2-201ENST00000447755 1422 ntBASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 AC009093.10-201ENST00000641956 1442 ntBASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC4Q5GLZ8 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HERC4Q5GLZ8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms