Protein–RNA interactions for Protein: Q3SY05

LINC00303, Putative uncharacterized protein encoded by LINC00303, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00303Q3SY05 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 AC127383.1-201ENST00000444697 1800 ntBASIC13.65□□□□□ -0.22
LINC00303Q3SY05 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 FAU-202ENST00000434372 533 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 AC107464.3-201ENST00000609172 737 ntBASIC13.65□□□□□ -0.22
LINC00303Q3SY05 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 AC148477.9-201ENST00000623974 539 ntBASIC13.65□□□□□ -0.22
LINC00303Q3SY05 AC005618.3-201ENST00000624928 458 ntBASIC13.65□□□□□ -0.22
LINC00303Q3SY05 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.65□□□□□ -0.22
LINC00303Q3SY05 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00303Q3SY05 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 MIR557-201ENST00000385239 98 ntBASIC13.64□□□□□ -0.23
LINC00303Q3SY05 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 AC093752.3-201ENST00000567343 901 ntBASIC13.64□□□□□ -0.23
LINC00303Q3SY05 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 AP001527.2-201ENST00000614441 631 ntBASIC13.64□□□□□ -0.23
LINC00303Q3SY05 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00303Q3SY05 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00303Q3SY05 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00303Q3SY05 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LINC00303Q3SY05 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00303Q3SY05 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms