Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.03□□□□□ -0.32
SCN1BQ07699 DUX4L27-201ENST00000554796 1261 ntBASIC13.03□□□□□ -0.32
SCN1BQ07699 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.03□□□□□ -0.32
SCN1BQ07699 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.03□□□□□ -0.32
SCN1BQ07699 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SCN1BQ07699 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SCN1BQ07699 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.03□□□□□ -0.32
SCN1BQ07699 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SCN1BQ07699 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SCN1BQ07699 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.03□□□□□ -0.32
SCN1BQ07699 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
SCN1BQ07699 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SCN1BQ07699 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SCN1BQ07699 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.03□□□□□ -0.32
SCN1BQ07699 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SCN1BQ07699 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.03□□□□□ -0.32
SCN1BQ07699 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.03□□□□□ -0.32
SCN1BQ07699 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SCN1BQ07699 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.03□□□□□ -0.32
SCN1BQ07699 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SCN1BQ07699 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SCN1BQ07699 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
SCN1BQ07699 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
SCN1BQ07699 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
SCN1BQ07699 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.02□□□□□ -0.32
SCN1BQ07699 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SCN1BQ07699 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SCN1BQ07699 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SCN1BQ07699 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SCN1BQ07699 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SCN1BQ07699 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.02□□□□□ -0.32
SCN1BQ07699 RN7SL832P-201ENST00000607781 1756 ntBASIC13.02□□□□□ -0.32
SCN1BQ07699 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SCN1BQ07699 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SCN1BQ07699 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.02□□□□□ -0.32
SCN1BQ07699 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
SCN1BQ07699 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.02□□□□□ -0.32
SCN1BQ07699 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
SCN1BQ07699 AL445209.1-201ENST00000607269 3491 ntBASIC13.02□□□□□ -0.32
SCN1BQ07699 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
SCN1BQ07699 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SCN1BQ07699 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
SCN1BQ07699 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
SCN1BQ07699 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SCN1BQ07699 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCN1BQ07699 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCN1BQ07699 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SCN1BQ07699 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.02□□□□□ -0.33
SCN1BQ07699 AC092580.3-201ENST00000430932 139 ntBASIC13.02□□□□□ -0.33
SCN1BQ07699 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.02□□□□□ -0.33
SCN1BQ07699 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.02□□□□□ -0.33
SCN1BQ07699 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.02□□□□□ -0.33
SCN1BQ07699 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SCN1BQ07699 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.02□□□□□ -0.33
SCN1BQ07699 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.02□□□□□ -0.33
SCN1BQ07699 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.02□□□□□ -0.33
SCN1BQ07699 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.02□□□□□ -0.33
SCN1BQ07699 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.02□□□□□ -0.33
SCN1BQ07699 AL390754.1-201ENST00000619088 582 ntBASIC13.02□□□□□ -0.33
SCN1BQ07699 AL590560.3-201ENST00000623350 461 ntBASIC13.02□□□□□ -0.33
SCN1BQ07699 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCN1BQ07699 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.02□□□□□ -0.33
SCN1BQ07699 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCN1BQ07699 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.02□□□□□ -0.33
SCN1BQ07699 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCN1BQ07699 AGAP10P-201ENST00000454844 2418 ntBASIC13.02□□□□□ -0.33
SCN1BQ07699 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.02□□□□□ -0.33
SCN1BQ07699 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.02□□□□□ -0.33
SCN1BQ07699 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCN1BQ07699 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCN1BQ07699 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCN1BQ07699 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.02□□□□□ -0.33
SCN1BQ07699 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCN1BQ07699 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCN1BQ07699 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
SCN1BQ07699 POM121L14P-201ENST00000406100 1558 ntBASIC13.02□□□□□ -0.33
SCN1BQ07699 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.02□□□□□ -0.33
SCN1BQ07699 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCN1BQ07699 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.02□□□□□ -0.33
SCN1BQ07699 PTPRVP-205ENST00000641549 5067 ntBASIC13.02□□□□□ -0.33
SCN1BQ07699 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.02□□□□□ -0.33
SCN1BQ07699 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SCN1BQ07699 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SCN1BQ07699 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC13.02□□□□□ -0.33
SCN1BQ07699 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SCN1BQ07699 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SCN1BQ07699 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SCN1BQ07699 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SCN1BQ07699 AP000437.1-201ENST00000624057 2085 ntBASIC13.01□□□□□ -0.33
SCN1BQ07699 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SCN1BQ07699 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SCN1BQ07699 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SCN1BQ07699 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SCN1BQ07699 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SCN1BQ07699 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SCN1BQ07699 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SCN1BQ07699 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SCN1BQ07699 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SCN1BQ07699 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SCN1BQ07699 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms