Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.67□□□□□ -0.22
TRA2BP62995 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.67□□□□□ -0.22
TRA2BP62995 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.67□□□□□ -0.22
TRA2BP62995 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRA2BP62995 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.67□□□□□ -0.22
TRA2BP62995 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.67□□□□□ -0.22
TRA2BP62995 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRA2BP62995 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.67□□□□□ -0.22
TRA2BP62995 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.67□□□□□ -0.22
TRA2BP62995 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.67□□□□□ -0.22
TRA2BP62995 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.67□□□□□ -0.22
TRA2BP62995 CYP4F23P-201ENST00000593402 1579 ntBASIC13.66□□□□□ -0.22
TRA2BP62995 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.66□□□□□ -0.22
TRA2BP62995 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.66□□□□□ -0.22
TRA2BP62995 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRA2BP62995 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.66□□□□□ -0.22
TRA2BP62995 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.66□□□□□ -0.22
TRA2BP62995 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
TRA2BP62995 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRA2BP62995 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRA2BP62995 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.66□□□□□ -0.22
TRA2BP62995 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRA2BP62995 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.66□□□□□ -0.22
TRA2BP62995 AC021723.1-201ENST00000486306 515 ntBASIC13.66□□□□□ -0.22
TRA2BP62995 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.66□□□□□ -0.22
TRA2BP62995 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRA2BP62995 AL512310.5-201ENST00000551999 515 ntBASIC13.66□□□□□ -0.22
TRA2BP62995 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.66□□□□□ -0.22
TRA2BP62995 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 RN7SL560P-201ENST00000577943 264 ntBASIC13.66□□□□□ -0.22
TRA2BP62995 KRT18P8-201ENST00000581937 1246 ntBASIC13.66□□□□□ -0.22
TRA2BP62995 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.66□□□□□ -0.22
TRA2BP62995 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
TRA2BP62995 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.66□□□□□ -0.22
TRA2BP62995 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRA2BP62995 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.66□□□□□ -0.22
TRA2BP62995 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRA2BP62995 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRA2BP62995 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TRA2BP62995 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRA2BP62995 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRA2BP62995 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRA2BP62995 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRA2BP62995 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRA2BP62995 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.65□□□□□ -0.22
TRA2BP62995 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRA2BP62995 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRA2BP62995 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRA2BP62995 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRA2BP62995 OR8S1-201ENST00000310194 1080 ntBASIC13.65□□□□□ -0.22
TRA2BP62995 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRA2BP62995 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRA2BP62995 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TRA2BP62995 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRA2BP62995 KRT18P36-201ENST00000411618 1276 ntBASIC13.65□□□□□ -0.22
TRA2BP62995 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.65□□□□□ -0.22
TRA2BP62995 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.65□□□□□ -0.22
TRA2BP62995 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.65□□□□□ -0.22
TRA2BP62995 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.65□□□□□ -0.22
TRA2BP62995 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.65□□□□□ -0.22
TRA2BP62995 MIR4259-201ENST00000584466 101 ntBASIC13.65□□□□□ -0.22
TRA2BP62995 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.65□□□□□ -0.22
TRA2BP62995 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.65□□□□□ -0.22
TRA2BP62995 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRA2BP62995 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRA2BP62995 AC007952.5-201ENST00000572818 1486 ntBASIC13.65□□□□□ -0.22
TRA2BP62995 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms