Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.94□□□□□ -0.18
VSX2P58304 AC006122.1-201ENST00000493323 440 ntBASIC13.94□□□□□ -0.18
VSX2P58304 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
VSX2P58304 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.94□□□□□ -0.18
VSX2P58304 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.94□□□□□ -0.18
VSX2P58304 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
VSX2P58304 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.94□□□□□ -0.18
VSX2P58304 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.94□□□□□ -0.18
VSX2P58304 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.94□□□□□ -0.18
VSX2P58304 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
VSX2P58304 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.94□□□□□ -0.18
VSX2P58304 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
VSX2P58304 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
VSX2P58304 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
VSX2P58304 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.94□□□□□ -0.18
VSX2P58304 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.94□□□□□ -0.18
VSX2P58304 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
VSX2P58304 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VSX2P58304 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VSX2P58304 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VSX2P58304 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VSX2P58304 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.93□□□□□ -0.18
VSX2P58304 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.93□□□□□ -0.18
VSX2P58304 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VSX2P58304 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.93□□□□□ -0.18
VSX2P58304 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.93□□□□□ -0.18
VSX2P58304 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
VSX2P58304 AC215219.1-201ENST00000400706 1817 ntBASIC13.93□□□□□ -0.18
VSX2P58304 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VSX2P58304 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.93□□□□□ -0.18
VSX2P58304 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.93□□□□□ -0.18
VSX2P58304 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.93□□□□□ -0.18
VSX2P58304 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VSX2P58304 BX284668.4-201ENST00000453917 508 ntBASIC13.93□□□□□ -0.18
VSX2P58304 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.93□□□□□ -0.18
VSX2P58304 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.93□□□□□ -0.18
VSX2P58304 HIST2H2BC-201ENST00000498492 580 ntBASIC13.93□□□□□ -0.18
VSX2P58304 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.93□□□□□ -0.18
VSX2P58304 AC027237.1-201ENST00000560942 655 ntBASIC13.93□□□□□ -0.18
VSX2P58304 SNORD3B-2-202ENST00000571722 791 ntBASIC13.93□□□□□ -0.18
VSX2P58304 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VSX2P58304 AC133540.1-201ENST00000620845 1019 ntBASIC13.93□□□□□ -0.18
VSX2P58304 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VSX2P58304 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VSX2P58304 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.93□□□□□ -0.18
VSX2P58304 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VSX2P58304 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
VSX2P58304 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VSX2P58304 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.93□□□□□ -0.18
VSX2P58304 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VSX2P58304 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VSX2P58304 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.93□□□□□ -0.18
VSX2P58304 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.93□□□□□ -0.18
VSX2P58304 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VSX2P58304 FAM90A7P-201ENST00000382628 1395 ntBASIC13.93□□□□□ -0.18
VSX2P58304 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VSX2P58304 FAM90A23P-201ENST00000400136 1395 ntBASIC13.93□□□□□ -0.18
VSX2P58304 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.93□□□□□ -0.18
VSX2P58304 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VSX2P58304 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
VSX2P58304 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VSX2P58304 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VSX2P58304 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.93□□□□□ -0.18
VSX2P58304 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VSX2P58304 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
VSX2P58304 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
VSX2P58304 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.92□□□□□ -0.18
VSX2P58304 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
VSX2P58304 CYP4F23P-201ENST00000593402 1579 ntBASIC13.92□□□□□ -0.18
VSX2P58304 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.92□□□□□ -0.18
VSX2P58304 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
VSX2P58304 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
VSX2P58304 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
VSX2P58304 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
VSX2P58304 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.92□□□□□ -0.18
VSX2P58304 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms