Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.3□□□□□ -0.44
NKX2-5P52952 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
NKX2-5P52952 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.3□□□□□ -0.44
NKX2-5P52952 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.3□□□□□ -0.44
NKX2-5P52952 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 CYTH1-210ENST00000589297 3756 ntTSL 5 BASIC12.3□□□□□ -0.44
NKX2-5P52952 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
NKX2-5P52952 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 PNMA5-201ENST00000361887 3197 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.3□□□□□ -0.44
NKX2-5P52952 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12.3□□□□□ -0.44
NKX2-5P52952 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC12.3□□□□□ -0.44
NKX2-5P52952 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.3□□□□□ -0.44
NKX2-5P52952 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
NKX2-5P52952 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.3□□□□□ -0.44
NKX2-5P52952 DUT-205ENST00000558813 769 ntTSL 2 BASIC12.3□□□□□ -0.44
NKX2-5P52952 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC12.3□□□□□ -0.44
NKX2-5P52952 MIR6074-201ENST00000612054 107 ntBASIC12.3□□□□□ -0.44
NKX2-5P52952 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.3□□□□□ -0.44
NKX2-5P52952 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC12.3□□□□□ -0.44
NKX2-5P52952 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 LIMK2-202ENST00000333611 3462 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 VDR-208ENST00000550325 3925 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
NKX2-5P52952 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
NKX2-5P52952 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC12.3□□□□□ -0.44
NKX2-5P52952 AC006037.2-201ENST00000622975 2232 ntBASIC12.3□□□□□ -0.44
NKX2-5P52952 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.3□□□□□ -0.44
NKX2-5P52952 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.3□□□□□ -0.44
NKX2-5P52952 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC12.3□□□□□ -0.44
NKX2-5P52952 MED24-201ENST00000356271 3446 ntTSL 2 BASIC12.3□□□□□ -0.44
NKX2-5P52952 MROH7-204ENST00000409996 2977 ntTSL 5 BASIC12.3□□□□□ -0.44
NKX2-5P52952 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.3□□□□□ -0.44
NKX2-5P52952 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 LINC01165-201ENST00000445190 1623 ntBASIC12.29□□□□□ -0.44
NKX2-5P52952 AC011481.3-201ENST00000623895 5594 ntBASIC12.29□□□□□ -0.44
NKX2-5P52952 FKBP4-201ENST00000001008 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 AC137834.1-201ENST00000548184 2107 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
NKX2-5P52952 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
NKX2-5P52952 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC12.29□□□□□ -0.44
NKX2-5P52952 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 LMX1A-202ENST00000342310 3545 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
NKX2-5P52952 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC12.29□□□□□ -0.44
NKX2-5P52952 IDO2-204ENST00000502986 2294 ntTSL 5 BASIC12.29□□□□□ -0.44
NKX2-5P52952 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
NKX2-5P52952 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
NKX2-5P52952 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.29□□□□□ -0.44
NKX2-5P52952 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.29□□□□□ -0.44
NKX2-5P52952 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.29□□□□□ -0.44
NKX2-5P52952 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC12.29□□□□□ -0.44
NKX2-5P52952 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.29□□□□□ -0.44
NKX2-5P52952 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.29□□□□□ -0.44
NKX2-5P52952 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.29□□□□□ -0.44
NKX2-5P52952 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.29□□□□□ -0.44
NKX2-5P52952 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
NKX2-5P52952 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC12.29□□□□□ -0.44
NKX2-5P52952 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
NKX2-5P52952 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
NKX2-5P52952 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC12.29□□□□□ -0.44
NKX2-5P52952 AC018645.3-201ENST00000628855 2646 ntBASIC12.29□□□□□ -0.44
NKX2-5P52952 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
NKX2-5P52952 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.29□□□□□ -0.44
NKX2-5P52952 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 HSPA8P9-201ENST00000485881 1943 ntBASIC12.29□□□□□ -0.44
NKX2-5P52952 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
NKX2-5P52952 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX2-5P52952 PTPRVP-205ENST00000641549 5067 ntBASIC12.29□□□□□ -0.44
NKX2-5P52952 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 AC008758.4-201ENST00000435033 2593 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NKX2-5P52952 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX2-5P52952 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
NKX2-5P52952 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms