Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6P35125 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6P35125 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6P35125 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6P35125 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
USP6P35125 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP6P35125 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP6P35125 PHB-210ENST00000511832 1509 ntTSL 2 BASIC19.11■□□□□ 0.65
USP6P35125 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC19.11■□□□□ 0.65
USP6P35125 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6P35125 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6P35125 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP6P35125 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC19.11■□□□□ 0.65
USP6P35125 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC19.11■□□□□ 0.65
USP6P35125 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC19.11■□□□□ 0.65
USP6P35125 AC063952.3-201ENST00000467756 308 ntBASIC19.11■□□□□ 0.65
USP6P35125 AC100858.1-201ENST00000514059 1228 ntBASIC19.11■□□□□ 0.65
USP6P35125 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
USP6P35125 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
USP6P35125 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP6P35125 HSPA8P5-201ENST00000456928 2069 ntBASIC19.11■□□□□ 0.65
USP6P35125 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP6P35125 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC19.11■□□□□ 0.65
USP6P35125 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6P35125 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6P35125 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6P35125 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
USP6P35125 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6P35125 MPI-203ENST00000535694 1523 ntTSL 2 BASIC19.11■□□□□ 0.65
USP6P35125 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC19.11■□□□□ 0.65
USP6P35125 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.11■□□□□ 0.65
USP6P35125 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP6P35125 AL590824.1-201ENST00000403828 1349 ntBASIC19.11■□□□□ 0.65
USP6P35125 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
USP6P35125 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6P35125 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
USP6P35125 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6P35125 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
USP6P35125 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC19.1■□□□□ 0.65
USP6P35125 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6P35125 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6P35125 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
USP6P35125 ABCD1P4-201ENST00000399687 604 ntBASIC19.1■□□□□ 0.65
USP6P35125 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC19.1■□□□□ 0.65
USP6P35125 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC19.1■□□□□ 0.65
USP6P35125 FAU-202ENST00000434372 533 ntTSL 2 BASIC19.1■□□□□ 0.65
USP6P35125 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC19.1■□□□□ 0.65
USP6P35125 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC19.1■□□□□ 0.65
USP6P35125 SRP14-204ENST00000558720 780 ntTSL 2 BASIC19.1■□□□□ 0.65
USP6P35125 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP6P35125 AC006548.2-201ENST00000605217 529 ntBASIC19.1■□□□□ 0.65
USP6P35125 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC19.1■□□□□ 0.65
USP6P35125 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP6P35125 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6P35125 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6P35125 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6P35125 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6P35125 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
USP6P35125 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6P35125 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6P35125 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6P35125 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC19.1■□□□□ 0.65
USP6P35125 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP6P35125 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP6P35125 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.1■□□□□ 0.65
USP6P35125 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC19.1■□□□□ 0.65
USP6P35125 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
USP6P35125 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC19.09■□□□□ 0.65
USP6P35125 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP6P35125 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC19.09■□□□□ 0.65
USP6P35125 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC19.09■□□□□ 0.65
USP6P35125 SSR4-202ENST00000370085 526 ntTSL 2 BASIC19.09■□□□□ 0.65
USP6P35125 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC19.09■□□□□ 0.65
USP6P35125 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP6P35125 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC19.09■□□□□ 0.65
USP6P35125 AL512599.1-201ENST00000430724 685 ntBASIC19.09■□□□□ 0.65
USP6P35125 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC19.09■□□□□ 0.65
USP6P35125 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC19.09■□□□□ 0.65
USP6P35125 ALG1L7P-201ENST00000502317 768 ntBASIC19.09■□□□□ 0.65
USP6P35125 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC19.09■□□□□ 0.65
USP6P35125 AC087203.1-201ENST00000532111 1181 ntBASIC19.09■□□□□ 0.65
USP6P35125 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC19.09■□□□□ 0.65
USP6P35125 AC092862.1-201ENST00000541534 533 ntBASIC19.09■□□□□ 0.65
USP6P35125 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC19.09■□□□□ 0.65
USP6P35125 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC19.09■□□□□ 0.65
USP6P35125 EIF5AP2-201ENST00000585668 1047 ntBASIC19.09■□□□□ 0.65
USP6P35125 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC19.09■□□□□ 0.65
USP6P35125 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC19.09■□□□□ 0.65
USP6P35125 AC026336.4-201ENST00000624565 1050 ntBASIC19.09■□□□□ 0.65
USP6P35125 AP000769.1-203ENST00000637245 208 ntBASIC19.09■□□□□ 0.65
USP6P35125 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC19.09■□□□□ 0.65
USP6P35125 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP6P35125 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP6P35125 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP6P35125 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP6P35125 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP6P35125 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP6P35125 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP6P35125 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC19.09■□□□□ 0.65
USP6P35125 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms