Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GABRB3P28472 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.39□□□□□ -0.11
GABRB3P28472 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GABRB3P28472 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
GABRB3P28472 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 AC015909.5-201ENST00000624336 2266 ntBASIC14.39□□□□□ -0.11
GABRB3P28472 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GABRB3P28472 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GABRB3P28472 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRB3P28472 USP17L6P-201ENST00000382470 1197 ntBASIC14.39□□□□□ -0.11
GABRB3P28472 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.39□□□□□ -0.11
GABRB3P28472 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.39□□□□□ -0.11
GABRB3P28472 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
GABRB3P28472 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.39□□□□□ -0.11
GABRB3P28472 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GABRB3P28472 AC005225.4-201ENST00000557330 545 ntBASIC14.39□□□□□ -0.11
GABRB3P28472 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 AC106886.1-201ENST00000568660 600 ntBASIC14.39□□□□□ -0.11
GABRB3P28472 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.39□□□□□ -0.11
GABRB3P28472 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRB3P28472 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.39□□□□□ -0.11
GABRB3P28472 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.39□□□□□ -0.11
GABRB3P28472 AC008687.7-202ENST00000637404 953 ntBASIC14.39□□□□□ -0.11
GABRB3P28472 Z98259.2-201ENST00000641583 609 ntBASIC14.39□□□□□ -0.11
GABRB3P28472 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GABRB3P28472 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GABRB3P28472 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.39□□□□□ -0.11
GABRB3P28472 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.39□□□□□ -0.11
GABRB3P28472 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRB3P28472 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 PPT1-213ENST00000641319 2388 ntBASIC14.39□□□□□ -0.11
GABRB3P28472 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRB3P28472 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB3P28472 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GABRB3P28472 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GABRB3P28472 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
GABRB3P28472 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
GABRB3P28472 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.38□□□□□ -0.11
GABRB3P28472 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.38□□□□□ -0.11
GABRB3P28472 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.38□□□□□ -0.11
GABRB3P28472 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.38□□□□□ -0.11
GABRB3P28472 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
GABRB3P28472 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 KRT17P7-201ENST00000451704 1104 ntBASIC14.38□□□□□ -0.11
GABRB3P28472 COX20P2-201ENST00000452636 358 ntBASIC14.38□□□□□ -0.11
GABRB3P28472 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.38□□□□□ -0.11
GABRB3P28472 CTBP2P5-201ENST00000454986 1264 ntBASIC14.38□□□□□ -0.11
GABRB3P28472 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.38□□□□□ -0.11
GABRB3P28472 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.38□□□□□ -0.11
GABRB3P28472 AL512343.1-201ENST00000605837 169 ntBASIC14.38□□□□□ -0.11
GABRB3P28472 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.38□□□□□ -0.11
GABRB3P28472 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.38□□□□□ -0.11
GABRB3P28472 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GABRB3P28472 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GABRB3P28472 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GABRB3P28472 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB3P28472 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.38□□□□□ -0.11
GABRB3P28472 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.38□□□□□ -0.11
GABRB3P28472 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.38□□□□□ -0.11
GABRB3P28472 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.37□□□□□ -0.11
GABRB3P28472 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms