Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL4P13236 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CCL4P13236 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.56□□□□□ -0.24
CCL4P13236 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
CCL4P13236 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL4P13236 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CCL4P13236 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL4P13236 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL4P13236 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL4P13236 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL4P13236 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL4P13236 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC13.56□□□□□ -0.24
CCL4P13236 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL4P13236 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC13.56□□□□□ -0.24
CCL4P13236 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.56□□□□□ -0.24
CCL4P13236 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL4P13236 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL4P13236 SCARNA12-201ENST00000459155 270 ntBASIC13.56□□□□□ -0.24
CCL4P13236 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC13.56□□□□□ -0.24
CCL4P13236 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.56□□□□□ -0.24
CCL4P13236 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL4P13236 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL4P13236 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL4P13236 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CCL4P13236 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.56□□□□□ -0.24
CCL4P13236 AC006158.1-201ENST00000610661 249 ntBASIC13.56□□□□□ -0.24
CCL4P13236 MIR6756-201ENST00000616240 63 ntBASIC13.56□□□□□ -0.24
CCL4P13236 AC138466.5-201ENST00000624002 808 ntBASIC13.56□□□□□ -0.24
CCL4P13236 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL4P13236 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.56□□□□□ -0.24
CCL4P13236 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL4P13236 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL4P13236 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL4P13236 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL4P13236 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
CCL4P13236 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL4P13236 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CCL4P13236 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL4P13236 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CCL4P13236 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL4P13236 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CCL4P13236 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
CCL4P13236 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CCL4P13236 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CCL4P13236 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CCL4P13236 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CCL4P13236 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.55□□□□□ -0.24
CCL4P13236 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL4P13236 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.55□□□□□ -0.24
CCL4P13236 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC13.55□□□□□ -0.24
CCL4P13236 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.55□□□□□ -0.24
CCL4P13236 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC13.55□□□□□ -0.24
CCL4P13236 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC13.55□□□□□ -0.24
CCL4P13236 AC098934.1-203ENST00000442868 1262 ntBASIC13.55□□□□□ -0.24
CCL4P13236 REEP5-205ENST00000504247 480 ntTSL 5 BASIC13.55□□□□□ -0.24
CCL4P13236 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC13.55□□□□□ -0.24
CCL4P13236 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL4P13236 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.55□□□□□ -0.24
CCL4P13236 C2orf69P1-201ENST00000563532 1093 ntBASIC13.55□□□□□ -0.24
CCL4P13236 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL4P13236 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL4P13236 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 LINC00115-201ENST00000473798 1317 ntBASIC13.55□□□□□ -0.24
CCL4P13236 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CCL4P13236 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
CCL4P13236 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CCL4P13236 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL4P13236 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.55□□□□□ -0.24
CCL4P13236 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL4P13236 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL4P13236 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.55□□□□□ -0.24
CCL4P13236 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL4P13236 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CCL4P13236 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.55□□□□□ -0.24
CCL4P13236 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL4P13236 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.55□□□□□ -0.24
CCL4P13236 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms