Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AL355102.3-201ENST00000554299 1678 ntBASIC11.53□□□□□ -0.56
IFNA1P01562 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
IFNA1P01562 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
IFNA1P01562 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC11.53□□□□□ -0.56
IFNA1P01562 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
IFNA1P01562 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC11.53□□□□□ -0.56
IFNA1P01562 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.53□□□□□ -0.56
IFNA1P01562 TFAMP1-201ENST00000412727 736 ntBASIC11.53□□□□□ -0.56
IFNA1P01562 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.53□□□□□ -0.56
IFNA1P01562 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.53□□□□□ -0.56
IFNA1P01562 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
IFNA1P01562 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.53□□□□□ -0.56
IFNA1P01562 IGHV3-62-201ENST00000520057 340 ntBASIC11.53□□□□□ -0.56
IFNA1P01562 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
IFNA1P01562 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC11.53□□□□□ -0.56
IFNA1P01562 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
IFNA1P01562 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
IFNA1P01562 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 F2-205ENST00000530231 1849 ntTSL 5 BASIC11.53□□□□□ -0.56
IFNA1P01562 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC11.53□□□□□ -0.56
IFNA1P01562 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
IFNA1P01562 KRT8P14-201ENST00000414254 1442 ntBASIC11.52□□□□□ -0.56
IFNA1P01562 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
IFNA1P01562 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
IFNA1P01562 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
IFNA1P01562 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
IFNA1P01562 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
IFNA1P01562 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
IFNA1P01562 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
IFNA1P01562 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
IFNA1P01562 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
IFNA1P01562 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
IFNA1P01562 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
IFNA1P01562 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
IFNA1P01562 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.52□□□□□ -0.57
IFNA1P01562 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.52□□□□□ -0.57
IFNA1P01562 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
IFNA1P01562 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
IFNA1P01562 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
IFNA1P01562 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.52□□□□□ -0.57
IFNA1P01562 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
IFNA1P01562 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
IFNA1P01562 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
IFNA1P01562 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
IFNA1P01562 AC009947.1-201ENST00000444350 727 ntBASIC11.52□□□□□ -0.57
IFNA1P01562 AC018712.1-201ENST00000455767 687 ntBASIC11.52□□□□□ -0.57
IFNA1P01562 AC074386.1-202ENST00000463561 864 ntBASIC11.52□□□□□ -0.57
IFNA1P01562 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11.52□□□□□ -0.57
IFNA1P01562 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.52□□□□□ -0.57
IFNA1P01562 AP002472.1-201ENST00000577490 586 ntBASIC11.52□□□□□ -0.57
IFNA1P01562 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC11.52□□□□□ -0.57
IFNA1P01562 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC11.52□□□□□ -0.57
IFNA1P01562 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
IFNA1P01562 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
IFNA1P01562 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
IFNA1P01562 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
IFNA1P01562 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC11.52□□□□□ -0.57
IFNA1P01562 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
IFNA1P01562 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
IFNA1P01562 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.52□□□□□ -0.57
IFNA1P01562 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
IFNA1P01562 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
IFNA1P01562 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
IFNA1P01562 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
IFNA1P01562 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.57
IFNA1P01562 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
IFNA1P01562 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.52□□□□□ -0.57
IFNA1P01562 MARK2P9-201ENST00000430958 1727 ntBASIC11.52□□□□□ -0.57
IFNA1P01562 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.52□□□□□ -0.57
IFNA1P01562 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
IFNA1P01562 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
IFNA1P01562 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
IFNA1P01562 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC11.51□□□□□ -0.57
IFNA1P01562 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.51□□□□□ -0.57
IFNA1P01562 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
IFNA1P01562 AC008620.2-201ENST00000510294 1569 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms