Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC11.9□□□□□ -0.5
SSSCA1O60232 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.9□□□□□ -0.5
SSSCA1O60232 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
SSSCA1O60232 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.9□□□□□ -0.5
SSSCA1O60232 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.9□□□□□ -0.5
SSSCA1O60232 AL139094.1-201ENST00000405549 1188 ntBASIC11.9□□□□□ -0.5
SSSCA1O60232 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC11.9□□□□□ -0.5
SSSCA1O60232 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC11.9□□□□□ -0.5
SSSCA1O60232 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.9□□□□□ -0.5
SSSCA1O60232 AC022616.1-201ENST00000518688 554 ntBASIC11.9□□□□□ -0.5
SSSCA1O60232 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
SSSCA1O60232 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.9□□□□□ -0.5
SSSCA1O60232 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC11.9□□□□□ -0.5
SSSCA1O60232 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.9□□□□□ -0.5
SSSCA1O60232 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC11.9□□□□□ -0.5
SSSCA1O60232 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC11.9□□□□□ -0.5
SSSCA1O60232 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC11.9□□□□□ -0.5
SSSCA1O60232 NME4-212ENST00000621774 904 ntTSL 3 BASIC11.9□□□□□ -0.5
SSSCA1O60232 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC11.9□□□□□ -0.5
SSSCA1O60232 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.9□□□□□ -0.5
SSSCA1O60232 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SSSCA1O60232 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC11.9□□□□□ -0.5
SSSCA1O60232 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SSSCA1O60232 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 AC118758.2-201ENST00000614242 2813 ntBASIC11.9□□□□□ -0.5
SSSCA1O60232 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SSSCA1O60232 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
SSSCA1O60232 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
SSSCA1O60232 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.9□□□□□ -0.51
SSSCA1O60232 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
SSSCA1O60232 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.89□□□□□ -0.51
SSSCA1O60232 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.89□□□□□ -0.51
SSSCA1O60232 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
SSSCA1O60232 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.89□□□□□ -0.51
SSSCA1O60232 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
SSSCA1O60232 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
SSSCA1O60232 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 AC135782.3-201ENST00000562782 2105 ntBASIC11.89□□□□□ -0.51
SSSCA1O60232 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC11.89□□□□□ -0.51
SSSCA1O60232 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.89□□□□□ -0.51
SSSCA1O60232 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.89□□□□□ -0.51
SSSCA1O60232 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.89□□□□□ -0.51
SSSCA1O60232 AC026410.3-201ENST00000514280 936 ntBASIC11.89□□□□□ -0.51
SSSCA1O60232 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC11.89□□□□□ -0.51
SSSCA1O60232 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.89□□□□□ -0.51
SSSCA1O60232 MIR4469-201ENST00000583919 79 ntBASIC11.89□□□□□ -0.51
SSSCA1O60232 AL049840.4-201ENST00000602422 811 ntBASIC11.89□□□□□ -0.51
SSSCA1O60232 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.89□□□□□ -0.51
SSSCA1O60232 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.89□□□□□ -0.51
SSSCA1O60232 BX539320.1-201ENST00000623759 877 ntBASIC11.89□□□□□ -0.51
SSSCA1O60232 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.89□□□□□ -0.51
SSSCA1O60232 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.89□□□□□ -0.51
SSSCA1O60232 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.89□□□□□ -0.51
SSSCA1O60232 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.89□□□□□ -0.51
SSSCA1O60232 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
SSSCA1O60232 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
SSSCA1O60232 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC11.89□□□□□ -0.51
SSSCA1O60232 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
SSSCA1O60232 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SSSCA1O60232 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
SSSCA1O60232 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.89□□□□□ -0.51
SSSCA1O60232 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms