Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC78A2IDD5 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC78A2IDD5 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC78A2IDD5 KHSRPP1-201ENST00000427983 1768 ntBASIC14.8□□□□□ -0.04
CCDC78A2IDD5 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC78A2IDD5 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC78A2IDD5 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCDC78A2IDD5 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC78A2IDD5 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC78A2IDD5 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC78A2IDD5 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC78A2IDD5 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC78A2IDD5 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC78A2IDD5 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CCDC78A2IDD5 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC78A2IDD5 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC78A2IDD5 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 CNN2P8-201ENST00000421872 913 ntBASIC14.79□□□□□ -0.04
CCDC78A2IDD5 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 AL359881.2-201ENST00000602973 570 ntBASIC14.79□□□□□ -0.04
CCDC78A2IDD5 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC78A2IDD5 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 CD8B2-202ENST00000417670 633 ntBASIC14.78□□□□□ -0.04
CCDC78A2IDD5 ARSEP1-201ENST00000420443 635 ntBASIC14.78□□□□□ -0.04
CCDC78A2IDD5 AC112492.5-201ENST00000421897 457 ntBASIC14.78□□□□□ -0.04
CCDC78A2IDD5 AC026954.1-201ENST00000429771 1293 ntBASIC14.78□□□□□ -0.04
CCDC78A2IDD5 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 AC234783.1-201ENST00000441761 496 ntBASIC14.78□□□□□ -0.04
CCDC78A2IDD5 ATP5G2P4-201ENST00000442175 420 ntBASIC14.78□□□□□ -0.04
CCDC78A2IDD5 CTBP2P5-201ENST00000454986 1264 ntBASIC14.78□□□□□ -0.04
CCDC78A2IDD5 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 HILS1-202ENST00000545329 423 ntBASIC14.78□□□□□ -0.04
CCDC78A2IDD5 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 AP006547.1-201ENST00000563435 692 ntBASIC14.78□□□□□ -0.04
CCDC78A2IDD5 RN7SL713P-201ENST00000582127 302 ntBASIC14.78□□□□□ -0.04
CCDC78A2IDD5 PPY2P-201ENST00000582808 702 ntBASIC14.78□□□□□ -0.04
CCDC78A2IDD5 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 AC079781.5-202ENST00000641784 3743 ntBASIC14.78□□□□□ -0.04
CCDC78A2IDD5 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC78A2IDD5 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms