Protein–RNA interactions for Protein: Q9Y534

CSDC2, Cold shock domain-containing protein C2, humanhuman

Known RBP Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2Q9Y534 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSDC2Q9Y534 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC15.67■□□□□ 0.1
CSDC2Q9Y534 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSDC2Q9Y534 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CSDC2Q9Y534 ALDH1A3-203ENST00000557963 1670 ntBASIC15.67■□□□□ 0.1
CSDC2Q9Y534 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSDC2Q9Y534 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CSDC2Q9Y534 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CSDC2Q9Y534 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSDC2Q9Y534 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSDC2Q9Y534 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSDC2Q9Y534 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSDC2Q9Y534 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSDC2Q9Y534 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSDC2Q9Y534 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSDC2Q9Y534 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSDC2Q9Y534 C1orf229-201ENST00000623686 2258 ntBASIC15.66■□□□□ 0.1
CSDC2Q9Y534 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSDC2Q9Y534 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSDC2Q9Y534 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSDC2Q9Y534 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSDC2Q9Y534 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.65■□□□□ 0.1
CSDC2Q9Y534 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSDC2Q9Y534 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.65■□□□□ 0.1
CSDC2Q9Y534 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSDC2Q9Y534 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CSDC2Q9Y534 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSDC2Q9Y534 MIR6765-201ENST00000614092 87 ntBASIC15.65■□□□□ 0.1
CSDC2Q9Y534 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSDC2Q9Y534 AL121603.2-201ENST00000557373 2117 ntBASIC15.65■□□□□ 0.1
CSDC2Q9Y534 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CSDC2Q9Y534 ECEL1P1-201ENST00000373592 1742 ntBASIC15.65■□□□□ 0.1
CSDC2Q9Y534 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSDC2Q9Y534 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSDC2Q9Y534 RNF126P1-201ENST00000567452 1320 ntBASIC15.65■□□□□ 0.1
CSDC2Q9Y534 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSDC2Q9Y534 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15.65■□□□□ 0.1
CSDC2Q9Y534 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSDC2Q9Y534 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSDC2Q9Y534 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSDC2Q9Y534 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CSDC2Q9Y534 ESRRAP2-201ENST00000418437 1549 ntBASIC15.64■□□□□ 0.09
CSDC2Q9Y534 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC15.64■□□□□ 0.09
CSDC2Q9Y534 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC15.64■□□□□ 0.09
CSDC2Q9Y534 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CSDC2Q9Y534 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CSDC2Q9Y534 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSDC2Q9Y534 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
CSDC2Q9Y534 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSDC2Q9Y534 LINC00526-201ENST00000581067 1875 ntBASIC15.64■□□□□ 0.09
CSDC2Q9Y534 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC15.64■□□□□ 0.09
CSDC2Q9Y534 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CSDC2Q9Y534 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSDC2Q9Y534 GUSBP5-202ENST00000510805 1989 ntBASIC15.64■□□□□ 0.09
CSDC2Q9Y534 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSDC2Q9Y534 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CSDC2Q9Y534 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CSDC2Q9Y534 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSDC2Q9Y534 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSDC2Q9Y534 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.63■□□□□ 0.09
CSDC2Q9Y534 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.63■□□□□ 0.09
CSDC2Q9Y534 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.63■□□□□ 0.09
CSDC2Q9Y534 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSDC2Q9Y534 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSDC2Q9Y534 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSDC2Q9Y534 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CSDC2Q9Y534 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSDC2Q9Y534 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSDC2Q9Y534 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSDC2Q9Y534 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSDC2Q9Y534 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.63■□□□□ 0.09
CSDC2Q9Y534 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSDC2Q9Y534 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSDC2Q9Y534 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CSDC2Q9Y534 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSDC2Q9Y534 LONRF2P2-201ENST00000439212 571 ntBASIC15.62■□□□□ 0.09
CSDC2Q9Y534 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC15.62■□□□□ 0.09
CSDC2Q9Y534 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC15.62■□□□□ 0.09
CSDC2Q9Y534 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSDC2Q9Y534 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CSDC2Q9Y534 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CSDC2Q9Y534 H19-210ENST00000439725 1929 ntTSL 2 BASIC15.62■□□□□ 0.09
CSDC2Q9Y534 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSDC2Q9Y534 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CSDC2Q9Y534 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSDC2Q9Y534 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSDC2Q9Y534 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSDC2Q9Y534 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSDC2Q9Y534 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CSDC2Q9Y534 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CSDC2Q9Y534 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CSDC2Q9Y534 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CSDC2Q9Y534 EP400NL-214ENST00000641289 2402 ntBASIC15.61■□□□□ 0.09
CSDC2Q9Y534 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSDC2Q9Y534 AL592293.1-201ENST00000502889 1188 ntBASIC15.61■□□□□ 0.09
CSDC2Q9Y534 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC15.61■□□□□ 0.09
CSDC2Q9Y534 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSDC2Q9Y534 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC15.61■□□□□ 0.09
CSDC2Q9Y534 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSDC2Q9Y534 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms