Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.11■□□□□ 0.49
LSM4Q9Y4Z0 AC087393.1-201ENST00000582896 145 ntBASIC18.11■□□□□ 0.49
LSM4Q9Y4Z0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.11■□□□□ 0.49
LSM4Q9Y4Z0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM4Q9Y4Z0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSM4Q9Y4Z0 AC233723.2-201ENST00000623798 2106 ntBASIC18.11■□□□□ 0.49
LSM4Q9Y4Z0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM4Q9Y4Z0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM4Q9Y4Z0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
LSM4Q9Y4Z0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.1■□□□□ 0.49
LSM4Q9Y4Z0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSM4Q9Y4Z0 AC092068.2-201ENST00000590491 1708 ntBASIC18.1■□□□□ 0.49
LSM4Q9Y4Z0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSM4Q9Y4Z0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSM4Q9Y4Z0 AL356441.2-201ENST00000443009 864 ntBASIC18.1■□□□□ 0.49
LSM4Q9Y4Z0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.1■□□□□ 0.49
LSM4Q9Y4Z0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.1■□□□□ 0.49
LSM4Q9Y4Z0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSM4Q9Y4Z0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LSM4Q9Y4Z0 DUSP8P3-201ENST00000399571 1760 ntBASIC18.09■□□□□ 0.49
LSM4Q9Y4Z0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM4Q9Y4Z0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSM4Q9Y4Z0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM4Q9Y4Z0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.09■□□□□ 0.49
LSM4Q9Y4Z0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSM4Q9Y4Z0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
LSM4Q9Y4Z0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM4Q9Y4Z0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM4Q9Y4Z0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.09■□□□□ 0.49
LSM4Q9Y4Z0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.09■□□□□ 0.49
LSM4Q9Y4Z0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LSM4Q9Y4Z0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSM4Q9Y4Z0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM4Q9Y4Z0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LSM4Q9Y4Z0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.08■□□□□ 0.48
LSM4Q9Y4Z0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.08■□□□□ 0.48
LSM4Q9Y4Z0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.08■□□□□ 0.48
LSM4Q9Y4Z0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LSM4Q9Y4Z0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LSM4Q9Y4Z0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LSM4Q9Y4Z0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.08■□□□□ 0.48
LSM4Q9Y4Z0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.08■□□□□ 0.48
LSM4Q9Y4Z0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
LSM4Q9Y4Z0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
LSM4Q9Y4Z0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LSM4Q9Y4Z0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LSM4Q9Y4Z0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LSM4Q9Y4Z0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LSM4Q9Y4Z0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LSM4Q9Y4Z0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.07■□□□□ 0.48
LSM4Q9Y4Z0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LSM4Q9Y4Z0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.07■□□□□ 0.48
LSM4Q9Y4Z0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.07■□□□□ 0.48
LSM4Q9Y4Z0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LSM4Q9Y4Z0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.07■□□□□ 0.48
LSM4Q9Y4Z0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.07■□□□□ 0.48
LSM4Q9Y4Z0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM4Q9Y4Z0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM4Q9Y4Z0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LSM4Q9Y4Z0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM4Q9Y4Z0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM4Q9Y4Z0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LSM4Q9Y4Z0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LSM4Q9Y4Z0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LSM4Q9Y4Z0 AC239859.2-201ENST00000444165 318 ntBASIC18.06■□□□□ 0.48
LSM4Q9Y4Z0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
LSM4Q9Y4Z0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.06■□□□□ 0.48
LSM4Q9Y4Z0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LSM4Q9Y4Z0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LSM4Q9Y4Z0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM4Q9Y4Z0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM4Q9Y4Z0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM4Q9Y4Z0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM4Q9Y4Z0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LSM4Q9Y4Z0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM4Q9Y4Z0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM4Q9Y4Z0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM4Q9Y4Z0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM4Q9Y4Z0 LONRF2P2-201ENST00000439212 571 ntBASIC18.05■□□□□ 0.48
LSM4Q9Y4Z0 RPS2P7-201ENST00000447334 885 ntBASIC18.05■□□□□ 0.48
LSM4Q9Y4Z0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM4Q9Y4Z0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.05■□□□□ 0.48
LSM4Q9Y4Z0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM4Q9Y4Z0 Z92544.1-202ENST00000571933 1220 ntBASIC18.05■□□□□ 0.48
LSM4Q9Y4Z0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.05■□□□□ 0.48
LSM4Q9Y4Z0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM4Q9Y4Z0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LSM4Q9Y4Z0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LSM4Q9Y4Z0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM4Q9Y4Z0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.04■□□□□ 0.48
LSM4Q9Y4Z0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LSM4Q9Y4Z0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LSM4Q9Y4Z0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LSM4Q9Y4Z0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM4Q9Y4Z0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.04■□□□□ 0.48
LSM4Q9Y4Z0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.04■□□□□ 0.48
LSM4Q9Y4Z0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM4Q9Y4Z0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.04■□□□□ 0.48
LSM4Q9Y4Z0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.04■□□□□ 0.48
LSM4Q9Y4Z0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms