Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
LIN7CQ9NUP9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
LIN7CQ9NUP9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LIN7CQ9NUP9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
LIN7CQ9NUP9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
LIN7CQ9NUP9 ANOS2P-203ENST00000472227 1816 ntBASIC18.77■□□□□ 0.59
LIN7CQ9NUP9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LIN7CQ9NUP9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LIN7CQ9NUP9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LIN7CQ9NUP9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LIN7CQ9NUP9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.76■□□□□ 0.59
LIN7CQ9NUP9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.76■□□□□ 0.59
LIN7CQ9NUP9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LIN7CQ9NUP9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LIN7CQ9NUP9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.76■□□□□ 0.59
LIN7CQ9NUP9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LIN7CQ9NUP9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.76■□□□□ 0.59
LIN7CQ9NUP9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LIN7CQ9NUP9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.76■□□□□ 0.59
LIN7CQ9NUP9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LIN7CQ9NUP9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LIN7CQ9NUP9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.76■□□□□ 0.59
LIN7CQ9NUP9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LIN7CQ9NUP9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LIN7CQ9NUP9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIN7CQ9NUP9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.75■□□□□ 0.59
LIN7CQ9NUP9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LIN7CQ9NUP9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LIN7CQ9NUP9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.75■□□□□ 0.59
LIN7CQ9NUP9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.75■□□□□ 0.59
LIN7CQ9NUP9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIN7CQ9NUP9 PKD1P6-201ENST00000343738 4769 ntBASIC18.75■□□□□ 0.59
LIN7CQ9NUP9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIN7CQ9NUP9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.75■□□□□ 0.59
LIN7CQ9NUP9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIN7CQ9NUP9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIN7CQ9NUP9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
LIN7CQ9NUP9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.74■□□□□ 0.59
LIN7CQ9NUP9 AC092068.2-201ENST00000590491 1708 ntBASIC18.74■□□□□ 0.59
LIN7CQ9NUP9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.74■□□□□ 0.59
LIN7CQ9NUP9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LIN7CQ9NUP9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.74■□□□□ 0.59
LIN7CQ9NUP9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.74■□□□□ 0.59
LIN7CQ9NUP9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LIN7CQ9NUP9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LIN7CQ9NUP9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LIN7CQ9NUP9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LIN7CQ9NUP9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LIN7CQ9NUP9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LIN7CQ9NUP9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LIN7CQ9NUP9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.74■□□□□ 0.59
LIN7CQ9NUP9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LIN7CQ9NUP9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 AL117328.2-201ENST00000624617 1940 ntBASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LIN7CQ9NUP9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LIN7CQ9NUP9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.72■□□□□ 0.59
LIN7CQ9NUP9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LIN7CQ9NUP9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LIN7CQ9NUP9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LIN7CQ9NUP9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
LIN7CQ9NUP9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.72■□□□□ 0.59
LIN7CQ9NUP9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.72■□□□□ 0.59
LIN7CQ9NUP9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
LIN7CQ9NUP9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LIN7CQ9NUP9 KRT8P33-201ENST00000508125 1423 ntBASIC18.72■□□□□ 0.59
LIN7CQ9NUP9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.72■□□□□ 0.59
LIN7CQ9NUP9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LIN7CQ9NUP9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LIN7CQ9NUP9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LIN7CQ9NUP9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LIN7CQ9NUP9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.71■□□□□ 0.59
LIN7CQ9NUP9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LIN7CQ9NUP9 AC103834.1-201ENST00000520383 144 ntBASIC18.71■□□□□ 0.59
LIN7CQ9NUP9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LIN7CQ9NUP9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LIN7CQ9NUP9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LIN7CQ9NUP9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LIN7CQ9NUP9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LIN7CQ9NUP9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.71■□□□□ 0.59
LIN7CQ9NUP9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.71■□□□□ 0.59
LIN7CQ9NUP9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LIN7CQ9NUP9 DUSP8P3-201ENST00000399571 1760 ntBASIC18.7■□□□□ 0.58
LIN7CQ9NUP9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms