Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ZFYVE1Q9HBF4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ZFYVE1Q9HBF4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ZFYVE1Q9HBF4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.72■■□□□ 1.23
ZFYVE1Q9HBF4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.72■■□□□ 1.23
ZFYVE1Q9HBF4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.72■■□□□ 1.23
ZFYVE1Q9HBF4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
ZFYVE1Q9HBF4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ZFYVE1Q9HBF4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
ZFYVE1Q9HBF4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
ZFYVE1Q9HBF4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
ZFYVE1Q9HBF4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.72■■□□□ 1.23
ZFYVE1Q9HBF4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ZFYVE1Q9HBF4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.72■■□□□ 1.23
ZFYVE1Q9HBF4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.71■■□□□ 1.23
ZFYVE1Q9HBF4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ZFYVE1Q9HBF4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ZFYVE1Q9HBF4 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.71■■□□□ 1.23
ZFYVE1Q9HBF4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.71■■□□□ 1.23
ZFYVE1Q9HBF4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ZFYVE1Q9HBF4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ZFYVE1Q9HBF4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
ZFYVE1Q9HBF4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
ZFYVE1Q9HBF4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
ZFYVE1Q9HBF4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.7■■□□□ 1.22
ZFYVE1Q9HBF4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZFYVE1Q9HBF4 AL356740.2-201ENST00000601559 647 ntBASIC22.7■■□□□ 1.22
ZFYVE1Q9HBF4 AL117332.1-201ENST00000622628 974 ntBASIC22.7■■□□□ 1.22
ZFYVE1Q9HBF4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZFYVE1Q9HBF4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ZFYVE1Q9HBF4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.7■■□□□ 1.22
ZFYVE1Q9HBF4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
ZFYVE1Q9HBF4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
ZFYVE1Q9HBF4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZFYVE1Q9HBF4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.69■■□□□ 1.22
ZFYVE1Q9HBF4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZFYVE1Q9HBF4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.69■■□□□ 1.22
ZFYVE1Q9HBF4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.69■■□□□ 1.22
ZFYVE1Q9HBF4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.69■■□□□ 1.22
ZFYVE1Q9HBF4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZFYVE1Q9HBF4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZFYVE1Q9HBF4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZFYVE1Q9HBF4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ZFYVE1Q9HBF4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
ZFYVE1Q9HBF4 MIR3621-201ENST00000580529 85 ntBASIC22.68■■□□□ 1.22
ZFYVE1Q9HBF4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ZFYVE1Q9HBF4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZFYVE1Q9HBF4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZFYVE1Q9HBF4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
ZFYVE1Q9HBF4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ZFYVE1Q9HBF4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZFYVE1Q9HBF4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZFYVE1Q9HBF4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZFYVE1Q9HBF4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZFYVE1Q9HBF4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.67■■□□□ 1.22
ZFYVE1Q9HBF4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.67■■□□□ 1.22
ZFYVE1Q9HBF4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZFYVE1Q9HBF4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.67■■□□□ 1.22
ZFYVE1Q9HBF4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZFYVE1Q9HBF4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.67■■□□□ 1.22
ZFYVE1Q9HBF4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.67■■□□□ 1.22
ZFYVE1Q9HBF4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
ZFYVE1Q9HBF4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZFYVE1Q9HBF4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ZFYVE1Q9HBF4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.66■■□□□ 1.22
ZFYVE1Q9HBF4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.66■■□□□ 1.22
ZFYVE1Q9HBF4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZFYVE1Q9HBF4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.66■■□□□ 1.22
ZFYVE1Q9HBF4 AC131212.1-201ENST00000613771 668 ntBASIC22.66■■□□□ 1.22
ZFYVE1Q9HBF4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.66■■□□□ 1.22
ZFYVE1Q9HBF4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZFYVE1Q9HBF4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZFYVE1Q9HBF4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
ZFYVE1Q9HBF4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ZFYVE1Q9HBF4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
ZFYVE1Q9HBF4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZFYVE1Q9HBF4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZFYVE1Q9HBF4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZFYVE1Q9HBF4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ZFYVE1Q9HBF4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.65■■□□□ 1.22
ZFYVE1Q9HBF4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.65■■□□□ 1.22
ZFYVE1Q9HBF4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.65■■□□□ 1.22
ZFYVE1Q9HBF4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.65■■□□□ 1.22
ZFYVE1Q9HBF4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.65■■□□□ 1.22
ZFYVE1Q9HBF4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ZFYVE1Q9HBF4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ZFYVE1Q9HBF4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ZFYVE1Q9HBF4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.64■■□□□ 1.22
ZFYVE1Q9HBF4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ZFYVE1Q9HBF4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ZFYVE1Q9HBF4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.64■■□□□ 1.22
ZFYVE1Q9HBF4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ZFYVE1Q9HBF4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
ZFYVE1Q9HBF4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ZFYVE1Q9HBF4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ZFYVE1Q9HBF4 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.63■■□□□ 1.21
ZFYVE1Q9HBF4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
ZFYVE1Q9HBF4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.63■■□□□ 1.21
ZFYVE1Q9HBF4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ZFYVE1Q9HBF4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms