Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM2Q9C040 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM2Q9C040 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM2Q9C040 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM2Q9C040 AC004448.1-201ENST00000458332 883 ntBASIC20.79■□□□□ 0.92
TRIM2Q9C040 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TRIM2Q9C040 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM2Q9C040 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM2Q9C040 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM2Q9C040 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM2Q9C040 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM2Q9C040 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM2Q9C040 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM2Q9C040 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM2Q9C040 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM2Q9C040 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRIM2Q9C040 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM2Q9C040 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TRIM2Q9C040 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM2Q9C040 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TRIM2Q9C040 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM2Q9C040 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM2Q9C040 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM2Q9C040 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM2Q9C040 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.78■□□□□ 0.92
TRIM2Q9C040 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.78■□□□□ 0.92
TRIM2Q9C040 AC009299.2-201ENST00000482477 511 ntBASIC20.78■□□□□ 0.92
TRIM2Q9C040 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TRIM2Q9C040 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM2Q9C040 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM2Q9C040 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM2Q9C040 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM2Q9C040 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM2Q9C040 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM2Q9C040 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM2Q9C040 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM2Q9C040 AC103724.3-201ENST00000564481 992 ntBASIC20.77■□□□□ 0.92
TRIM2Q9C040 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM2Q9C040 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM2Q9C040 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.77■□□□□ 0.92
TRIM2Q9C040 AC092068.2-201ENST00000590491 1708 ntBASIC20.77■□□□□ 0.92
TRIM2Q9C040 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TRIM2Q9C040 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM2Q9C040 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM2Q9C040 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.77■□□□□ 0.91
TRIM2Q9C040 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM2Q9C040 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM2Q9C040 AC012676.1-201ENST00000574705 1949 ntBASIC20.76■□□□□ 0.91
TRIM2Q9C040 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM2Q9C040 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM2Q9C040 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
TRIM2Q9C040 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM2Q9C040 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TRIM2Q9C040 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM2Q9C040 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM2Q9C040 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM2Q9C040 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM2Q9C040 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM2Q9C040 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM2Q9C040 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM2Q9C040 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM2Q9C040 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM2Q9C040 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM2Q9C040 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM2Q9C040 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM2Q9C040 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM2Q9C040 AC068473.5-201ENST00000616428 2072 ntBASIC20.74■□□□□ 0.91
TRIM2Q9C040 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM2Q9C040 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM2Q9C040 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM2Q9C040 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM2Q9C040 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM2Q9C040 AL031848.2-201ENST00000607670 837 ntBASIC20.74■□□□□ 0.91
TRIM2Q9C040 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM2Q9C040 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM2Q9C040 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM2Q9C040 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TRIM2Q9C040 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.73■□□□□ 0.91
TRIM2Q9C040 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM2Q9C040 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TRIM2Q9C040 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TRIM2Q9C040 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM2Q9C040 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM2Q9C040 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM2Q9C040 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM2Q9C040 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM2Q9C040 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM2Q9C040 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM2Q9C040 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM2Q9C040 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM2Q9C040 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM2Q9C040 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.71■□□□□ 0.91
TRIM2Q9C040 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM2Q9C040 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM2Q9C040 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM2Q9C040 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM2Q9C040 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM2Q9C040 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM2Q9C040 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.71■□□□□ 0.91
TRIM2Q9C040 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms