Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL8AQ9BWD3 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.35■□□□□ 0.69
RTL8AQ9BWD3 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.35■□□□□ 0.69
RTL8AQ9BWD3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL8AQ9BWD3 AC009299.2-201ENST00000482477 511 ntBASIC19.35■□□□□ 0.69
RTL8AQ9BWD3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTL8AQ9BWD3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTL8AQ9BWD3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 AL451085.2-201ENST00000605085 799 ntBASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RTL8AQ9BWD3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
RTL8AQ9BWD3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTL8AQ9BWD3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTL8AQ9BWD3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL8AQ9BWD3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.33■□□□□ 0.68
RTL8AQ9BWD3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.33■□□□□ 0.68
RTL8AQ9BWD3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.33■□□□□ 0.68
RTL8AQ9BWD3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTL8AQ9BWD3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.33■□□□□ 0.68
RTL8AQ9BWD3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTL8AQ9BWD3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.32■□□□□ 0.68
RTL8AQ9BWD3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.32■□□□□ 0.68
RTL8AQ9BWD3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL8AQ9BWD3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL8AQ9BWD3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RTL8AQ9BWD3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.32■□□□□ 0.68
RTL8AQ9BWD3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTL8AQ9BWD3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RTL8AQ9BWD3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.32■□□□□ 0.68
RTL8AQ9BWD3 AC239859.2-201ENST00000444165 318 ntBASIC19.32■□□□□ 0.68
RTL8AQ9BWD3 MIR4787-201ENST00000607364 84 ntBASIC19.32■□□□□ 0.68
RTL8AQ9BWD3 AC092028.1-203ENST00000608262 953 ntBASIC19.32■□□□□ 0.68
RTL8AQ9BWD3 MIR6722-201ENST00000617286 78 ntBASIC19.32■□□□□ 0.68
RTL8AQ9BWD3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.32■□□□□ 0.68
RTL8AQ9BWD3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.32■□□□□ 0.68
RTL8AQ9BWD3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL8AQ9BWD3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RTL8AQ9BWD3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.31■□□□□ 0.68
RTL8AQ9BWD3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL8AQ9BWD3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.31■□□□□ 0.68
RTL8AQ9BWD3 DUSP8P5-201ENST00000422884 1815 ntBASIC19.31■□□□□ 0.68
RTL8AQ9BWD3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL8AQ9BWD3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL8AQ9BWD3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
RTL8AQ9BWD3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL8AQ9BWD3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RTL8AQ9BWD3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RTL8AQ9BWD3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTL8AQ9BWD3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL8AQ9BWD3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL8AQ9BWD3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTL8AQ9BWD3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTL8AQ9BWD3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL8AQ9BWD3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.3■□□□□ 0.68
RTL8AQ9BWD3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.3■□□□□ 0.68
RTL8AQ9BWD3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RTL8AQ9BWD3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.3■□□□□ 0.68
RTL8AQ9BWD3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTL8AQ9BWD3 ANOS2P-203ENST00000472227 1816 ntBASIC19.3■□□□□ 0.68
RTL8AQ9BWD3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.3■□□□□ 0.68
RTL8AQ9BWD3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL8AQ9BWD3 AC005703.6-201ENST00000623265 1329 ntBASIC19.29■□□□□ 0.68
RTL8AQ9BWD3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL8AQ9BWD3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL8AQ9BWD3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL8AQ9BWD3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
RTL8AQ9BWD3 MTDHP2-201ENST00000601468 714 ntBASIC19.29■□□□□ 0.68
RTL8AQ9BWD3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL8AQ9BWD3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL8AQ9BWD3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL8AQ9BWD3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL8AQ9BWD3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.29■□□□□ 0.68
RTL8AQ9BWD3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RTL8AQ9BWD3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RTL8AQ9BWD3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RTL8AQ9BWD3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL8AQ9BWD3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL8AQ9BWD3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL8AQ9BWD3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTL8AQ9BWD3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL8AQ9BWD3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL8AQ9BWD3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms