Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.83■□□□□ 0.77
VRK1Q99986 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.83■□□□□ 0.77
VRK1Q99986 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.83■□□□□ 0.77
VRK1Q99986 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.83■□□□□ 0.77
VRK1Q99986 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VRK1Q99986 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
VRK1Q99986 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VRK1Q99986 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VRK1Q99986 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
VRK1Q99986 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VRK1Q99986 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
VRK1Q99986 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.82■□□□□ 0.76
VRK1Q99986 MIR6724-1-201ENST00000616420 92 ntBASIC19.82■□□□□ 0.76
VRK1Q99986 MIR6724-2-201ENST00000616483 92 ntBASIC19.82■□□□□ 0.76
VRK1Q99986 MIR6724-4-201ENST00000617390 92 ntBASIC19.82■□□□□ 0.76
VRK1Q99986 MIR6724-3-201ENST00000622482 92 ntBASIC19.82■□□□□ 0.76
VRK1Q99986 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.82■□□□□ 0.76
VRK1Q99986 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VRK1Q99986 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.82■□□□□ 0.76
VRK1Q99986 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
VRK1Q99986 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
VRK1Q99986 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.81■□□□□ 0.76
VRK1Q99986 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VRK1Q99986 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
VRK1Q99986 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.81■□□□□ 0.76
VRK1Q99986 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.81■□□□□ 0.76
VRK1Q99986 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.81■□□□□ 0.76
VRK1Q99986 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.81■□□□□ 0.76
VRK1Q99986 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.81■□□□□ 0.76
VRK1Q99986 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
VRK1Q99986 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
VRK1Q99986 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VRK1Q99986 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VRK1Q99986 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VRK1Q99986 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VRK1Q99986 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.8■□□□□ 0.76
VRK1Q99986 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.8■□□□□ 0.76
VRK1Q99986 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VRK1Q99986 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VRK1Q99986 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.8■□□□□ 0.76
VRK1Q99986 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.8■□□□□ 0.76
VRK1Q99986 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.8■□□□□ 0.76
VRK1Q99986 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VRK1Q99986 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
VRK1Q99986 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
VRK1Q99986 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VRK1Q99986 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.79■□□□□ 0.76
VRK1Q99986 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VRK1Q99986 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.79■□□□□ 0.76
VRK1Q99986 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.79■□□□□ 0.76
VRK1Q99986 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.79■□□□□ 0.76
VRK1Q99986 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.79■□□□□ 0.76
VRK1Q99986 AL356740.2-201ENST00000601559 647 ntBASIC19.79■□□□□ 0.76
VRK1Q99986 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VRK1Q99986 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VRK1Q99986 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VRK1Q99986 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.78■□□□□ 0.76
VRK1Q99986 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
VRK1Q99986 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.78■□□□□ 0.76
VRK1Q99986 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
VRK1Q99986 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.78■□□□□ 0.76
VRK1Q99986 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
VRK1Q99986 DUSP8P5-201ENST00000422884 1815 ntBASIC19.78■□□□□ 0.76
VRK1Q99986 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VRK1Q99986 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VRK1Q99986 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
VRK1Q99986 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VRK1Q99986 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
VRK1Q99986 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VRK1Q99986 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VRK1Q99986 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.77■□□□□ 0.76
VRK1Q99986 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.77■□□□□ 0.76
VRK1Q99986 AL117332.1-201ENST00000622628 974 ntBASIC19.77■□□□□ 0.76
VRK1Q99986 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.77■□□□□ 0.76
VRK1Q99986 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VRK1Q99986 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
VRK1Q99986 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
VRK1Q99986 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
VRK1Q99986 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
VRK1Q99986 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.76■□□□□ 0.75
VRK1Q99986 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
VRK1Q99986 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
VRK1Q99986 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.76■□□□□ 0.75
VRK1Q99986 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VRK1Q99986 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.76■□□□□ 0.75
VRK1Q99986 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.76■□□□□ 0.75
VRK1Q99986 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VRK1Q99986 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.76■□□□□ 0.75
VRK1Q99986 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VRK1Q99986 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VRK1Q99986 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
VRK1Q99986 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VRK1Q99986 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VRK1Q99986 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.75■□□□□ 0.75
VRK1Q99986 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VRK1Q99986 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.75■□□□□ 0.75
VRK1Q99986 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VRK1Q99986 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.75■□□□□ 0.75
VRK1Q99986 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.75■□□□□ 0.75
VRK1Q99986 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms