Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLCC1Q96S66 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCC1Q96S66 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCC1Q96S66 LINC00565-201ENST00000562710 2331 ntBASIC18.9■□□□□ 0.62
CLCC1Q96S66 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLCC1Q96S66 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCC1Q96S66 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLCC1Q96S66 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCC1Q96S66 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCC1Q96S66 SLC25A24-204ENST00000569674 2357 ntBASIC18.89■□□□□ 0.61
CLCC1Q96S66 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCC1Q96S66 KRT18P10-201ENST00000388836 1287 ntBASIC18.89■□□□□ 0.61
CLCC1Q96S66 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.89■□□□□ 0.61
CLCC1Q96S66 NTF6A-201ENST00000591175 560 ntBASIC18.89■□□□□ 0.61
CLCC1Q96S66 MIR6765-201ENST00000614092 87 ntBASIC18.89■□□□□ 0.61
CLCC1Q96S66 AL117328.2-201ENST00000624617 1940 ntBASIC18.89■□□□□ 0.61
CLCC1Q96S66 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCC1Q96S66 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCC1Q96S66 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCC1Q96S66 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLCC1Q96S66 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCC1Q96S66 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCC1Q96S66 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLCC1Q96S66 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCC1Q96S66 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCC1Q96S66 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCC1Q96S66 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCC1Q96S66 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.88■□□□□ 0.61
CLCC1Q96S66 DUX4L18-201ENST00000553347 1267 ntBASIC18.88■□□□□ 0.61
CLCC1Q96S66 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.88■□□□□ 0.61
CLCC1Q96S66 AC129492.7-201ENST00000622992 756 ntBASIC18.88■□□□□ 0.61
CLCC1Q96S66 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCC1Q96S66 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.88■□□□□ 0.61
CLCC1Q96S66 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCC1Q96S66 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCC1Q96S66 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CLCC1Q96S66 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CLCC1Q96S66 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCC1Q96S66 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCC1Q96S66 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCC1Q96S66 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCC1Q96S66 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCC1Q96S66 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCC1Q96S66 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCC1Q96S66 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLCC1Q96S66 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CLCC1Q96S66 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.87■□□□□ 0.61
CLCC1Q96S66 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLCC1Q96S66 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CLCC1Q96S66 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CLCC1Q96S66 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLCC1Q96S66 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCC1Q96S66 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CLCC1Q96S66 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.86■□□□□ 0.61
CLCC1Q96S66 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.86■□□□□ 0.61
CLCC1Q96S66 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCC1Q96S66 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.86■□□□□ 0.61
CLCC1Q96S66 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCC1Q96S66 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCC1Q96S66 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.86■□□□□ 0.61
CLCC1Q96S66 AC138932.1-201ENST00000534164 6830 ntBASIC18.86■□□□□ 0.61
CLCC1Q96S66 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCC1Q96S66 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.86■□□□□ 0.61
CLCC1Q96S66 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.86■□□□□ 0.61
CLCC1Q96S66 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLCC1Q96S66 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CLCC1Q96S66 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CLCC1Q96S66 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.86■□□□□ 0.61
CLCC1Q96S66 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCC1Q96S66 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLCC1Q96S66 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCC1Q96S66 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLCC1Q96S66 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCC1Q96S66 RPS2P7-201ENST00000447334 885 ntBASIC18.85■□□□□ 0.61
CLCC1Q96S66 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCC1Q96S66 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CLCC1Q96S66 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCC1Q96S66 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCC1Q96S66 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCC1Q96S66 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLCC1Q96S66 C9orf163-202ENST00000624034 2573 ntBASIC18.85■□□□□ 0.61
CLCC1Q96S66 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCC1Q96S66 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCC1Q96S66 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCC1Q96S66 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLCC1Q96S66 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.84■□□□□ 0.61
CLCC1Q96S66 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CLCC1Q96S66 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCC1Q96S66 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCC1Q96S66 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCC1Q96S66 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCC1Q96S66 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CLCC1Q96S66 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
CLCC1Q96S66 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCC1Q96S66 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCC1Q96S66 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.83■□□□□ 0.61
CLCC1Q96S66 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.83■□□□□ 0.61
CLCC1Q96S66 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.83■□□□□ 0.6
CLCC1Q96S66 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLCC1Q96S66 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms