Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF183Q96D59 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF183Q96D59 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF183Q96D59 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF183Q96D59 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF183Q96D59 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF183Q96D59 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF183Q96D59 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.68■□□□□ 0.26
RNF183Q96D59 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.68■□□□□ 0.26
RNF183Q96D59 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF183Q96D59 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF183Q96D59 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF183Q96D59 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF183Q96D59 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RNF183Q96D59 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF183Q96D59 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF183Q96D59 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
RNF183Q96D59 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF183Q96D59 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RNF183Q96D59 AL139246.5-201ENST00000606645 996 ntBASIC16.67■□□□□ 0.26
RNF183Q96D59 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF183Q96D59 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF183Q96D59 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF183Q96D59 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF183Q96D59 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF183Q96D59 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF183Q96D59 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF183Q96D59 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF183Q96D59 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF183Q96D59 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF183Q96D59 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF183Q96D59 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF183Q96D59 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF183Q96D59 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF183Q96D59 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF183Q96D59 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF183Q96D59 AL161729.1-201ENST00000604104 1402 ntBASIC16.66■□□□□ 0.26
RNF183Q96D59 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF183Q96D59 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RNF183Q96D59 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF183Q96D59 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF183Q96D59 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF183Q96D59 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF183Q96D59 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF183Q96D59 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF183Q96D59 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF183Q96D59 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF183Q96D59 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF183Q96D59 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF183Q96D59 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF183Q96D59 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF183Q96D59 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF183Q96D59 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF183Q96D59 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF183Q96D59 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF183Q96D59 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF183Q96D59 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF183Q96D59 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF183Q96D59 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF183Q96D59 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF183Q96D59 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
RNF183Q96D59 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF183Q96D59 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF183Q96D59 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF183Q96D59 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF183Q96D59 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF183Q96D59 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF183Q96D59 SRD5A1P1-201ENST00000442297 786 ntBASIC16.63■□□□□ 0.25
RNF183Q96D59 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.63■□□□□ 0.25
RNF183Q96D59 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF183Q96D59 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF183Q96D59 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF183Q96D59 HLA-L-211ENST00000482052 1765 ntBASIC16.63■□□□□ 0.25
RNF183Q96D59 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF183Q96D59 AC022211.4-201ENST00000625094 2161 ntBASIC16.62■□□□□ 0.25
RNF183Q96D59 AP003733.4-201ENST00000623785 1697 ntBASIC16.62■□□□□ 0.25
RNF183Q96D59 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF183Q96D59 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF183Q96D59 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF183Q96D59 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF183Q96D59 AC096631.2-201ENST00000436136 790 ntBASIC16.62■□□□□ 0.25
RNF183Q96D59 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.62■□□□□ 0.25
RNF183Q96D59 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF183Q96D59 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RNF183Q96D59 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF183Q96D59 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF183Q96D59 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF183Q96D59 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF183Q96D59 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF183Q96D59 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF183Q96D59 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNF183Q96D59 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF183Q96D59 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF183Q96D59 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF183Q96D59 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF183Q96D59 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF183Q96D59 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF183Q96D59 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.61■□□□□ 0.25
RNF183Q96D59 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF183Q96D59 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms