Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 AC074183.2-201ENST00000623112 922 ntBASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTN4IP1Q8WWV3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 AL033527.3-201ENST00000566366 1196 ntBASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 EP400NL-214ENST00000641289 2402 ntBASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
RTN4IP1Q8WWV3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4IP1Q8WWV3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4IP1Q8WWV3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4IP1Q8WWV3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.98■□□□□ 0.63
RTN4IP1Q8WWV3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.98■□□□□ 0.63
RTN4IP1Q8WWV3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4IP1Q8WWV3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.98■□□□□ 0.63
RTN4IP1Q8WWV3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.98■□□□□ 0.63
RTN4IP1Q8WWV3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.98■□□□□ 0.63
RTN4IP1Q8WWV3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4IP1Q8WWV3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4IP1Q8WWV3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.98■□□□□ 0.63
RTN4IP1Q8WWV3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTN4IP1Q8WWV3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.98■□□□□ 0.63
RTN4IP1Q8WWV3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.98■□□□□ 0.63
RTN4IP1Q8WWV3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.97■□□□□ 0.63
RTN4IP1Q8WWV3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.97■□□□□ 0.63
RTN4IP1Q8WWV3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.97■□□□□ 0.63
RTN4IP1Q8WWV3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RTN4IP1Q8WWV3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RTN4IP1Q8WWV3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4IP1Q8WWV3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4IP1Q8WWV3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4IP1Q8WWV3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4IP1Q8WWV3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4IP1Q8WWV3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.97■□□□□ 0.63
RTN4IP1Q8WWV3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTN4IP1Q8WWV3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.96■□□□□ 0.63
RTN4IP1Q8WWV3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4IP1Q8WWV3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4IP1Q8WWV3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RTN4IP1Q8WWV3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4IP1Q8WWV3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.96■□□□□ 0.63
RTN4IP1Q8WWV3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4IP1Q8WWV3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4IP1Q8WWV3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4IP1Q8WWV3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RTN4IP1Q8WWV3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RTN4IP1Q8WWV3 DUSP8P3-201ENST00000399571 1760 ntBASIC18.96■□□□□ 0.63
RTN4IP1Q8WWV3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTN4IP1Q8WWV3 PKD1P6-201ENST00000343738 4769 ntBASIC18.96■□□□□ 0.63
RTN4IP1Q8WWV3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 AC092068.2-201ENST00000590491 1708 ntBASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 AC022616.5-201ENST00000518796 181 ntBASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTN4IP1Q8WWV3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4IP1Q8WWV3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4IP1Q8WWV3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4IP1Q8WWV3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4IP1Q8WWV3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
RTN4IP1Q8WWV3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.94■□□□□ 0.62
RTN4IP1Q8WWV3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4IP1Q8WWV3 AC010980.1-201ENST00000587192 1142 ntBASIC18.94■□□□□ 0.62
RTN4IP1Q8WWV3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms