Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRTM2Q8N967 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM2Q8N967 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM2Q8N967 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM2Q8N967 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.56■□□□□ 0.56
LRTM2Q8N967 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM2Q8N967 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.56■□□□□ 0.56
LRTM2Q8N967 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM2Q8N967 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.56■□□□□ 0.56
LRTM2Q8N967 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM2Q8N967 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM2Q8N967 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LRTM2Q8N967 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.56■□□□□ 0.56
LRTM2Q8N967 AC016575.1-201ENST00000607026 382 ntBASIC18.56■□□□□ 0.56
LRTM2Q8N967 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM2Q8N967 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM2Q8N967 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM2Q8N967 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRTM2Q8N967 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.55■□□□□ 0.56
LRTM2Q8N967 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM2Q8N967 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM2Q8N967 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM2Q8N967 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
LRTM2Q8N967 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.55■□□□□ 0.56
LRTM2Q8N967 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.55■□□□□ 0.56
LRTM2Q8N967 AC007375.3-201ENST00000600936 2314 ntBASIC18.55■□□□□ 0.56
LRTM2Q8N967 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.55■□□□□ 0.56
LRTM2Q8N967 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM2Q8N967 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM2Q8N967 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM2Q8N967 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM2Q8N967 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM2Q8N967 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM2Q8N967 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM2Q8N967 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM2Q8N967 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM2Q8N967 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM2Q8N967 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM2Q8N967 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM2Q8N967 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LRTM2Q8N967 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM2Q8N967 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM2Q8N967 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LRTM2Q8N967 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM2Q8N967 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.54■□□□□ 0.56
LRTM2Q8N967 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM2Q8N967 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM2Q8N967 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM2Q8N967 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM2Q8N967 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.54■□□□□ 0.56
LRTM2Q8N967 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM2Q8N967 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM2Q8N967 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.54■□□□□ 0.56
LRTM2Q8N967 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM2Q8N967 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM2Q8N967 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.54■□□□□ 0.56
LRTM2Q8N967 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LRTM2Q8N967 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRTM2Q8N967 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRTM2Q8N967 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.53■□□□□ 0.56
LRTM2Q8N967 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRTM2Q8N967 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.53■□□□□ 0.56
LRTM2Q8N967 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRTM2Q8N967 AL022069.1-201ENST00000568025 1636 ntBASIC18.53■□□□□ 0.56
LRTM2Q8N967 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.53■□□□□ 0.56
LRTM2Q8N967 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRTM2Q8N967 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LRTM2Q8N967 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LRTM2Q8N967 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRTM2Q8N967 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRTM2Q8N967 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
LRTM2Q8N967 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRTM2Q8N967 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRTM2Q8N967 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRTM2Q8N967 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRTM2Q8N967 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
LRTM2Q8N967 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRTM2Q8N967 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRTM2Q8N967 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.51■□□□□ 0.55
LRTM2Q8N967 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
LRTM2Q8N967 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM2Q8N967 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM2Q8N967 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM2Q8N967 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM2Q8N967 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM2Q8N967 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM2Q8N967 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM2Q8N967 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LRTM2Q8N967 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM2Q8N967 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.51■□□□□ 0.55
LRTM2Q8N967 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRTM2Q8N967 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.51■□□□□ 0.55
LRTM2Q8N967 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM2Q8N967 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.5■□□□□ 0.55
LRTM2Q8N967 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM2Q8N967 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM2Q8N967 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM2Q8N967 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.5■□□□□ 0.55
LRTM2Q8N967 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.5■□□□□ 0.55
LRTM2Q8N967 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms