Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM20Q8N5G0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM20Q8N5G0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM20Q8N5G0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM20Q8N5G0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM20Q8N5G0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM20Q8N5G0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM20Q8N5G0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 EED-207ENST00000528180 1745 ntTSL 5 BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
SMIM20Q8N5G0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC14.18□□□□□ -0.14
SMIM20Q8N5G0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM20Q8N5G0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM20Q8N5G0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM20Q8N5G0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM20Q8N5G0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM20Q8N5G0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SMIM20Q8N5G0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM20Q8N5G0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM20Q8N5G0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM20Q8N5G0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SMIM20Q8N5G0 AC100797.4-201ENST00000631653 1827 ntBASIC14.17□□□□□ -0.14
SMIM20Q8N5G0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM20Q8N5G0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SMIM20Q8N5G0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SMIM20Q8N5G0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM20Q8N5G0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM20Q8N5G0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM20Q8N5G0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM20Q8N5G0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM20Q8N5G0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SMIM20Q8N5G0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SMIM20Q8N5G0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM20Q8N5G0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM20Q8N5G0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM20Q8N5G0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM20Q8N5G0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC14.16□□□□□ -0.14
SMIM20Q8N5G0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM20Q8N5G0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SMIM20Q8N5G0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM20Q8N5G0 AC096887.2-201ENST00000623443 1957 ntBASIC14.16□□□□□ -0.14
SMIM20Q8N5G0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM20Q8N5G0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM20Q8N5G0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM20Q8N5G0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM20Q8N5G0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SMIM20Q8N5G0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM20Q8N5G0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SMIM20Q8N5G0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM20Q8N5G0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM20Q8N5G0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM20Q8N5G0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM20Q8N5G0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SMIM20Q8N5G0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM20Q8N5G0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM20Q8N5G0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM20Q8N5G0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM20Q8N5G0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM20Q8N5G0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM20Q8N5G0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM20Q8N5G0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms