Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIST3H2BBQ8N257 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIST3H2BBQ8N257 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HIST3H2BBQ8N257 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIST3H2BBQ8N257 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIST3H2BBQ8N257 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HIST3H2BBQ8N257 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIST3H2BBQ8N257 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIST3H2BBQ8N257 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.05■□□□□ 0.32
HIST3H2BBQ8N257 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HIST3H2BBQ8N257 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIST3H2BBQ8N257 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HIST3H2BBQ8N257 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HIST3H2BBQ8N257 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIST3H2BBQ8N257 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HIST3H2BBQ8N257 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.05■□□□□ 0.32
HIST3H2BBQ8N257 AL157384.1-201ENST00000445995 2473 ntBASIC17.05■□□□□ 0.32
HIST3H2BBQ8N257 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.05■□□□□ 0.32
HIST3H2BBQ8N257 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 AC005229.4-201ENST00000610085 2198 ntBASIC17.04■□□□□ 0.32
HIST3H2BBQ8N257 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIST3H2BBQ8N257 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST3H2BBQ8N257 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST3H2BBQ8N257 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.03■□□□□ 0.32
HIST3H2BBQ8N257 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HIST3H2BBQ8N257 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HIST3H2BBQ8N257 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST3H2BBQ8N257 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HIST3H2BBQ8N257 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIST3H2BBQ8N257 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST3H2BBQ8N257 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST3H2BBQ8N257 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST3H2BBQ8N257 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HIST3H2BBQ8N257 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.03■□□□□ 0.32
HIST3H2BBQ8N257 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST3H2BBQ8N257 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST3H2BBQ8N257 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
HIST3H2BBQ8N257 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HIST3H2BBQ8N257 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST3H2BBQ8N257 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
HIST3H2BBQ8N257 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST3H2BBQ8N257 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HIST3H2BBQ8N257 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HIST3H2BBQ8N257 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.02■□□□□ 0.32
HIST3H2BBQ8N257 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST3H2BBQ8N257 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIST3H2BBQ8N257 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST3H2BBQ8N257 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
HIST3H2BBQ8N257 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.02■□□□□ 0.31
HIST3H2BBQ8N257 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST3H2BBQ8N257 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST3H2BBQ8N257 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
HIST3H2BBQ8N257 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST3H2BBQ8N257 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST3H2BBQ8N257 AC092053.2-201ENST00000640557 1818 ntBASIC17.01■□□□□ 0.31
HIST3H2BBQ8N257 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST3H2BBQ8N257 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST3H2BBQ8N257 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST3H2BBQ8N257 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms