Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.38■■■□□ 2.13
DDX60Q8IY21 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
DDX60Q8IY21 HYI-206ENST00000372434 1025 ntTSL 5 BASIC28.38■■■□□ 2.13
DDX60Q8IY21 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
DDX60Q8IY21 AL161729.1-201ENST00000604104 1402 ntBASIC28.37■■■□□ 2.13
DDX60Q8IY21 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
DDX60Q8IY21 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
DDX60Q8IY21 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
DDX60Q8IY21 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC28.37■■■□□ 2.13
DDX60Q8IY21 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC28.37■■■□□ 2.13
DDX60Q8IY21 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
DDX60Q8IY21 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.36■■■□□ 2.13
DDX60Q8IY21 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
DDX60Q8IY21 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.36■■■□□ 2.13
DDX60Q8IY21 AC104564.3-201ENST00000582367 638 ntBASIC28.36■■■□□ 2.13
DDX60Q8IY21 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.36■■■□□ 2.13
DDX60Q8IY21 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
DDX60Q8IY21 HES6-206ENST00000409574 738 ntTSL 2 BASIC28.35■■■□□ 2.13
DDX60Q8IY21 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC28.35■■■□□ 2.13
DDX60Q8IY21 AC009086.3-201ENST00000623486 1008 ntBASIC28.35■■■□□ 2.13
DDX60Q8IY21 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
DDX60Q8IY21 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
DDX60Q8IY21 VGF-203ENST00000611537 1622 ntTSL 5 BASIC28.34■■■□□ 2.13
DDX60Q8IY21 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
DDX60Q8IY21 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC28.33■■■□□ 2.13
DDX60Q8IY21 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
DDX60Q8IY21 SLC47A1P1-202ENST00000449666 945 ntBASIC28.33■■■□□ 2.13
DDX60Q8IY21 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
DDX60Q8IY21 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
DDX60Q8IY21 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
DDX60Q8IY21 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
DDX60Q8IY21 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC28.32■■■□□ 2.12
DDX60Q8IY21 RHOF-204ENST00000537265 699 ntTSL 2 BASIC28.32■■■□□ 2.12
DDX60Q8IY21 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC28.32■■■□□ 2.12
DDX60Q8IY21 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
DDX60Q8IY21 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
DDX60Q8IY21 ALDH1A3-203ENST00000557963 1670 ntBASIC28.32■■■□□ 2.12
DDX60Q8IY21 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
DDX60Q8IY21 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC28.32■■■□□ 2.12
DDX60Q8IY21 AC008764.7-201ENST00000593779 1081 ntBASIC28.32■■■□□ 2.12
DDX60Q8IY21 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
DDX60Q8IY21 AC022211.4-201ENST00000625094 2161 ntBASIC28.32■■■□□ 2.12
DDX60Q8IY21 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.31■■■□□ 2.12
DDX60Q8IY21 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
DDX60Q8IY21 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC28.31■■■□□ 2.12
DDX60Q8IY21 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
DDX60Q8IY21 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
DDX60Q8IY21 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
DDX60Q8IY21 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
DDX60Q8IY21 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
DDX60Q8IY21 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
DDX60Q8IY21 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC28.3■■■□□ 2.12
DDX60Q8IY21 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
DDX60Q8IY21 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
DDX60Q8IY21 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
DDX60Q8IY21 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.3■■■□□ 2.12
DDX60Q8IY21 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
DDX60Q8IY21 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
DDX60Q8IY21 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
DDX60Q8IY21 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
DDX60Q8IY21 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
DDX60Q8IY21 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
DDX60Q8IY21 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
DDX60Q8IY21 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
DDX60Q8IY21 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
DDX60Q8IY21 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC28.29■■■□□ 2.12
DDX60Q8IY21 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC28.29■■■□□ 2.12
DDX60Q8IY21 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.29■■■□□ 2.12
DDX60Q8IY21 GTSE1-AS1-202ENST00000623117 1518 ntBASIC28.28■■■□□ 2.12
DDX60Q8IY21 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
DDX60Q8IY21 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
DDX60Q8IY21 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC28.28■■■□□ 2.12
DDX60Q8IY21 MIR3181-201ENST00000578512 73 ntBASIC28.28■■■□□ 2.12
DDX60Q8IY21 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
DDX60Q8IY21 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
DDX60Q8IY21 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
DDX60Q8IY21 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
DDX60Q8IY21 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
DDX60Q8IY21 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC28.28■■■□□ 2.12
DDX60Q8IY21 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
DDX60Q8IY21 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
DDX60Q8IY21 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC28.27■■■□□ 2.12
DDX60Q8IY21 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
DDX60Q8IY21 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
DDX60Q8IY21 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
DDX60Q8IY21 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
DDX60Q8IY21 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
DDX60Q8IY21 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC28.26■■■□□ 2.12
DDX60Q8IY21 AC097381.1-201ENST00000429019 1296 ntBASIC28.26■■■□□ 2.12
DDX60Q8IY21 RBM38-205ENST00000440234 686 ntTSL 2 BASIC28.26■■■□□ 2.12
DDX60Q8IY21 MIR6821-201ENST00000617625 74 ntBASIC28.26■■■□□ 2.12
DDX60Q8IY21 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC28.26■■■□□ 2.11
DDX60Q8IY21 AC087623.3-201ENST00000607047 1098 ntBASIC28.26■■■□□ 2.11
DDX60Q8IY21 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.26■■■□□ 2.11
DDX60Q8IY21 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
DDX60Q8IY21 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
DDX60Q8IY21 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
DDX60Q8IY21 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
DDX60Q8IY21 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
DDX60Q8IY21 MIR5787-201ENST00000611784 55 ntBASIC28.25■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms