Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CROCCP3Q8IVE0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CROCCP3Q8IVE0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CROCCP3Q8IVE0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CROCCP3Q8IVE0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CROCCP3Q8IVE0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.51■□□□□ 0.87
CROCCP3Q8IVE0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CROCCP3Q8IVE0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.51■□□□□ 0.87
CROCCP3Q8IVE0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CROCCP3Q8IVE0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CROCCP3Q8IVE0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.5■□□□□ 0.87
CROCCP3Q8IVE0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CROCCP3Q8IVE0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.5■□□□□ 0.87
CROCCP3Q8IVE0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CROCCP3Q8IVE0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CROCCP3Q8IVE0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CROCCP3Q8IVE0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.5■□□□□ 0.87
CROCCP3Q8IVE0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CROCCP3Q8IVE0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
CROCCP3Q8IVE0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CROCCP3Q8IVE0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP3Q8IVE0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.49■□□□□ 0.87
CROCCP3Q8IVE0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP3Q8IVE0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP3Q8IVE0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP3Q8IVE0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP3Q8IVE0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP3Q8IVE0 MIR6089-201ENST00000616698 64 ntBASIC20.49■□□□□ 0.87
CROCCP3Q8IVE0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP3Q8IVE0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.49■□□□□ 0.87
CROCCP3Q8IVE0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CROCCP3Q8IVE0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP3Q8IVE0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP3Q8IVE0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP3Q8IVE0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CROCCP3Q8IVE0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.48■□□□□ 0.87
CROCCP3Q8IVE0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP3Q8IVE0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CROCCP3Q8IVE0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP3Q8IVE0 AC008813.1-201ENST00000536597 885 ntBASIC20.48■□□□□ 0.87
CROCCP3Q8IVE0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.48■□□□□ 0.87
CROCCP3Q8IVE0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP3Q8IVE0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP3Q8IVE0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP3Q8IVE0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CROCCP3Q8IVE0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP3Q8IVE0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.47■□□□□ 0.87
CROCCP3Q8IVE0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP3Q8IVE0 AL359258.2-201ENST00000564063 1566 ntBASIC20.47■□□□□ 0.87
CROCCP3Q8IVE0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.47■□□□□ 0.87
CROCCP3Q8IVE0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP3Q8IVE0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP3Q8IVE0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.47■□□□□ 0.87
CROCCP3Q8IVE0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CROCCP3Q8IVE0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP3Q8IVE0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CROCCP3Q8IVE0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CROCCP3Q8IVE0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CROCCP3Q8IVE0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
CROCCP3Q8IVE0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CROCCP3Q8IVE0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CROCCP3Q8IVE0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CROCCP3Q8IVE0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CROCCP3Q8IVE0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CROCCP3Q8IVE0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CROCCP3Q8IVE0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CROCCP3Q8IVE0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CROCCP3Q8IVE0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CROCCP3Q8IVE0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CROCCP3Q8IVE0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CROCCP3Q8IVE0 AC148477.6-201ENST00000623746 465 ntBASIC20.45■□□□□ 0.86
CROCCP3Q8IVE0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CROCCP3Q8IVE0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CROCCP3Q8IVE0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CROCCP3Q8IVE0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CROCCP3Q8IVE0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CROCCP3Q8IVE0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CROCCP3Q8IVE0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CROCCP3Q8IVE0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CROCCP3Q8IVE0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CROCCP3Q8IVE0 MIR219A2-201ENST00000608502 1504 ntBASIC20.44■□□□□ 0.86
CROCCP3Q8IVE0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CROCCP3Q8IVE0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.44■□□□□ 0.86
CROCCP3Q8IVE0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.44■□□□□ 0.86
CROCCP3Q8IVE0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CROCCP3Q8IVE0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
CROCCP3Q8IVE0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.43■□□□□ 0.86
CROCCP3Q8IVE0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CROCCP3Q8IVE0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CROCCP3Q8IVE0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.43■□□□□ 0.86
CROCCP3Q8IVE0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CROCCP3Q8IVE0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CROCCP3Q8IVE0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CROCCP3Q8IVE0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.43■□□□□ 0.86
CROCCP3Q8IVE0 AP006261.1-201ENST00000584783 668 ntBASIC20.43■□□□□ 0.86
CROCCP3Q8IVE0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CROCCP3Q8IVE0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CROCCP3Q8IVE0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CROCCP3Q8IVE0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CROCCP3Q8IVE0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms