Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.58■■□□□ 1.53
NPAS4Q8IUM7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NPAS4Q8IUM7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.58■■□□□ 1.53
NPAS4Q8IUM7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.58■■□□□ 1.53
NPAS4Q8IUM7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.58■■□□□ 1.53
NPAS4Q8IUM7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.58■■□□□ 1.53
NPAS4Q8IUM7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.58■■□□□ 1.52
NPAS4Q8IUM7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.58■■□□□ 1.52
NPAS4Q8IUM7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.57■■□□□ 1.52
NPAS4Q8IUM7 HLA-L-211ENST00000482052 1765 ntBASIC24.57■■□□□ 1.52
NPAS4Q8IUM7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NPAS4Q8IUM7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
NPAS4Q8IUM7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
NPAS4Q8IUM7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
NPAS4Q8IUM7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NPAS4Q8IUM7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NPAS4Q8IUM7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
NPAS4Q8IUM7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NPAS4Q8IUM7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
NPAS4Q8IUM7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.56■■□□□ 1.52
NPAS4Q8IUM7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.56■■□□□ 1.52
NPAS4Q8IUM7 pRNA.6-201ENST00000610482 90 ntBASIC24.56■■□□□ 1.52
NPAS4Q8IUM7 pRNA.5-201ENST00000612139 90 ntBASIC24.56■■□□□ 1.52
NPAS4Q8IUM7 pRNA.11-201ENST00000618423 90 ntBASIC24.56■■□□□ 1.52
NPAS4Q8IUM7 pRNA.13-201ENST00000619112 90 ntBASIC24.56■■□□□ 1.52
NPAS4Q8IUM7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NPAS4Q8IUM7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NPAS4Q8IUM7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.56■■□□□ 1.52
NPAS4Q8IUM7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NPAS4Q8IUM7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NPAS4Q8IUM7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NPAS4Q8IUM7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
NPAS4Q8IUM7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.55■■□□□ 1.52
NPAS4Q8IUM7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.55■■□□□ 1.52
NPAS4Q8IUM7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NPAS4Q8IUM7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
NPAS4Q8IUM7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NPAS4Q8IUM7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NPAS4Q8IUM7 ALDH1A3-203ENST00000557963 1670 ntBASIC24.54■■□□□ 1.52
NPAS4Q8IUM7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
NPAS4Q8IUM7 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.54■■□□□ 1.52
NPAS4Q8IUM7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NPAS4Q8IUM7 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.54■■□□□ 1.52
NPAS4Q8IUM7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
NPAS4Q8IUM7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NPAS4Q8IUM7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
NPAS4Q8IUM7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
NPAS4Q8IUM7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NPAS4Q8IUM7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.52■■□□□ 1.52
NPAS4Q8IUM7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
NPAS4Q8IUM7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.52■■□□□ 1.52
NPAS4Q8IUM7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
NPAS4Q8IUM7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NPAS4Q8IUM7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
NPAS4Q8IUM7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
NPAS4Q8IUM7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.52■■□□□ 1.52
NPAS4Q8IUM7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.52■■□□□ 1.52
NPAS4Q8IUM7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NPAS4Q8IUM7 AC141586.4-201ENST00000624558 1573 ntBASIC24.51■■□□□ 1.51
NPAS4Q8IUM7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NPAS4Q8IUM7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
NPAS4Q8IUM7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.51■■□□□ 1.51
NPAS4Q8IUM7 AC126544.1-201ENST00000580842 1059 ntBASIC24.51■■□□□ 1.51
NPAS4Q8IUM7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
NPAS4Q8IUM7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
NPAS4Q8IUM7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
NPAS4Q8IUM7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NPAS4Q8IUM7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
NPAS4Q8IUM7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.5■■□□□ 1.51
NPAS4Q8IUM7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.5■■□□□ 1.51
NPAS4Q8IUM7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
NPAS4Q8IUM7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NPAS4Q8IUM7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NPAS4Q8IUM7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NPAS4Q8IUM7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.49■■□□□ 1.51
NPAS4Q8IUM7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NPAS4Q8IUM7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.49■■□□□ 1.51
NPAS4Q8IUM7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
NPAS4Q8IUM7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
NPAS4Q8IUM7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.49■■□□□ 1.51
NPAS4Q8IUM7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NPAS4Q8IUM7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.48■■□□□ 1.51
NPAS4Q8IUM7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NPAS4Q8IUM7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
NPAS4Q8IUM7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.48■■□□□ 1.51
NPAS4Q8IUM7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
NPAS4Q8IUM7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
NPAS4Q8IUM7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.48■■□□□ 1.51
NPAS4Q8IUM7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
NPAS4Q8IUM7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.47■■□□□ 1.51
NPAS4Q8IUM7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
NPAS4Q8IUM7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NPAS4Q8IUM7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.47■■□□□ 1.51
NPAS4Q8IUM7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
NPAS4Q8IUM7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
NPAS4Q8IUM7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NPAS4Q8IUM7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NPAS4Q8IUM7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.47■■□□□ 1.51
NPAS4Q8IUM7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
NPAS4Q8IUM7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms