Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RAB43Q86YS6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAB43Q86YS6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAB43Q86YS6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RAB43Q86YS6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAB43Q86YS6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.52■■□□□ 1.04
RAB43Q86YS6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAB43Q86YS6 MIR6089-201ENST00000616698 64 ntBASIC21.52■■□□□ 1.04
RAB43Q86YS6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAB43Q86YS6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAB43Q86YS6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RAB43Q86YS6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RAB43Q86YS6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
RAB43Q86YS6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAB43Q86YS6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB43Q86YS6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAB43Q86YS6 UNC93B3-201ENST00000308076 687 ntBASIC21.51■■□□□ 1.03
RAB43Q86YS6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.51■■□□□ 1.03
RAB43Q86YS6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB43Q86YS6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB43Q86YS6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB43Q86YS6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.5■■□□□ 1.03
RAB43Q86YS6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.5■■□□□ 1.03
RAB43Q86YS6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.5■■□□□ 1.03
RAB43Q86YS6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB43Q86YS6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB43Q86YS6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RAB43Q86YS6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAB43Q86YS6 AL136162.1-201ENST00000607711 1078 ntBASIC21.5■■□□□ 1.03
RAB43Q86YS6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAB43Q86YS6 SLC6A10P-202ENST00000431994 2058 ntBASIC21.49■■□□□ 1.03
RAB43Q86YS6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAB43Q86YS6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.49■■□□□ 1.03
RAB43Q86YS6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.49■■□□□ 1.03
RAB43Q86YS6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAB43Q86YS6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RAB43Q86YS6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAB43Q86YS6 AC131274.2-201ENST00000580697 1507 ntBASIC21.49■■□□□ 1.03
RAB43Q86YS6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAB43Q86YS6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
RAB43Q86YS6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB43Q86YS6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB43Q86YS6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RAB43Q86YS6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAB43Q86YS6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.48■■□□□ 1.03
RAB43Q86YS6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.48■■□□□ 1.03
RAB43Q86YS6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAB43Q86YS6 AC079834.2-201ENST00000609776 1949 ntBASIC21.48■■□□□ 1.03
RAB43Q86YS6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB43Q86YS6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAB43Q86YS6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.48■■□□□ 1.03
RAB43Q86YS6 AC135279.3-201ENST00000610945 1311 ntBASIC21.48■■□□□ 1.03
RAB43Q86YS6 AL022069.1-201ENST00000568025 1636 ntBASIC21.47■■□□□ 1.03
RAB43Q86YS6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB43Q86YS6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB43Q86YS6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RAB43Q86YS6 DUX4L19-201ENST00000557448 1267 ntBASIC21.47■■□□□ 1.03
RAB43Q86YS6 AC142381.2-201ENST00000566120 298 ntBASIC21.47■■□□□ 1.03
RAB43Q86YS6 AC092171.4-201ENST00000609130 632 ntBASIC21.47■■□□□ 1.03
RAB43Q86YS6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RAB43Q86YS6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RAB43Q86YS6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.47■■□□□ 1.03
RAB43Q86YS6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB43Q86YS6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB43Q86YS6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB43Q86YS6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.46■■□□□ 1.03
RAB43Q86YS6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB43Q86YS6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAB43Q86YS6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RAB43Q86YS6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.46■■□□□ 1.03
RAB43Q86YS6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB43Q86YS6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.46■■□□□ 1.03
RAB43Q86YS6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB43Q86YS6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB43Q86YS6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAB43Q86YS6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAB43Q86YS6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RAB43Q86YS6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.45■■□□□ 1.02
RAB43Q86YS6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB43Q86YS6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB43Q86YS6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RAB43Q86YS6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
RAB43Q86YS6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB43Q86YS6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAB43Q86YS6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.44■■□□□ 1.02
RAB43Q86YS6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.44■■□□□ 1.02
RAB43Q86YS6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAB43Q86YS6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.44■■□□□ 1.02
RAB43Q86YS6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB43Q86YS6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB43Q86YS6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB43Q86YS6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RAB43Q86YS6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.44■■□□□ 1.02
RAB43Q86YS6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.44■■□□□ 1.02
RAB43Q86YS6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.44■■□□□ 1.02
RAB43Q86YS6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAB43Q86YS6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB43Q86YS6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.43■■□□□ 1.02
RAB43Q86YS6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.43■■□□□ 1.02
RAB43Q86YS6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms