Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CHD1LQ86WJ1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHD1LQ86WJ1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.11■■■□□ 2.09
CHD1LQ86WJ1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC28.11■■■□□ 2.09
CHD1LQ86WJ1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHD1LQ86WJ1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHD1LQ86WJ1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHD1LQ86WJ1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC28.11■■■□□ 2.09
CHD1LQ86WJ1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CHD1LQ86WJ1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CHD1LQ86WJ1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC28.11■■■□□ 2.09
CHD1LQ86WJ1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CHD1LQ86WJ1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHD1LQ86WJ1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
CHD1LQ86WJ1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC28.1■■■□□ 2.09
CHD1LQ86WJ1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC28.1■■■□□ 2.09
CHD1LQ86WJ1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1LQ86WJ1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1LQ86WJ1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1LQ86WJ1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1LQ86WJ1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1LQ86WJ1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.1■■■□□ 2.09
CHD1LQ86WJ1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1LQ86WJ1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CHD1LQ86WJ1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
CHD1LQ86WJ1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHD1LQ86WJ1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CHD1LQ86WJ1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHD1LQ86WJ1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHD1LQ86WJ1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHD1LQ86WJ1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CHD1LQ86WJ1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CHD1LQ86WJ1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC28.08■■■□□ 2.09
CHD1LQ86WJ1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC28.08■■■□□ 2.09
CHD1LQ86WJ1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC28.08■■■□□ 2.09
CHD1LQ86WJ1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
CHD1LQ86WJ1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC28.08■■■□□ 2.09
CHD1LQ86WJ1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
CHD1LQ86WJ1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
CHD1LQ86WJ1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC28.07■■■□□ 2.08
CHD1LQ86WJ1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC28.07■■■□□ 2.08
CHD1LQ86WJ1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CHD1LQ86WJ1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.07■■■□□ 2.08
CHD1LQ86WJ1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CHD1LQ86WJ1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CHD1LQ86WJ1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC28.06■■■□□ 2.08
CHD1LQ86WJ1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHD1LQ86WJ1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.06■■■□□ 2.08
CHD1LQ86WJ1 AC137630.3-201ENST00000607245 391 ntBASIC28.06■■■□□ 2.08
CHD1LQ86WJ1 AL031848.2-201ENST00000607670 837 ntBASIC28.06■■■□□ 2.08
CHD1LQ86WJ1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
CHD1LQ86WJ1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHD1LQ86WJ1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHD1LQ86WJ1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHD1LQ86WJ1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHD1LQ86WJ1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
CHD1LQ86WJ1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHD1LQ86WJ1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHD1LQ86WJ1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
CHD1LQ86WJ1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CHD1LQ86WJ1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
CHD1LQ86WJ1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
CHD1LQ86WJ1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CHD1LQ86WJ1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.05■■■□□ 2.08
CHD1LQ86WJ1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CHD1LQ86WJ1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC28.05■■■□□ 2.08
CHD1LQ86WJ1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CHD1LQ86WJ1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CHD1LQ86WJ1 SNX5-217ENST00000606557 1087 ntBASIC28.05■■■□□ 2.08
CHD1LQ86WJ1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHD1LQ86WJ1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHD1LQ86WJ1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHD1LQ86WJ1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
CHD1LQ86WJ1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC28.03■■■□□ 2.08
CHD1LQ86WJ1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
CHD1LQ86WJ1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.03■■■□□ 2.08
CHD1LQ86WJ1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC28.03■■■□□ 2.08
CHD1LQ86WJ1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.03■■■□□ 2.08
CHD1LQ86WJ1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC28.03■■■□□ 2.08
CHD1LQ86WJ1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CHD1LQ86WJ1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC28.03■■■□□ 2.08
CHD1LQ86WJ1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHD1LQ86WJ1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHD1LQ86WJ1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHD1LQ86WJ1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CHD1LQ86WJ1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC28.02■■■□□ 2.08
CHD1LQ86WJ1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC28.02■■■□□ 2.08
CHD1LQ86WJ1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.02■■■□□ 2.08
CHD1LQ86WJ1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CHD1LQ86WJ1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CHD1LQ86WJ1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.01■■■□□ 2.07
CHD1LQ86WJ1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC28.01■■■□□ 2.07
CHD1LQ86WJ1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC28.01■■■□□ 2.07
CHD1LQ86WJ1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC28.01■■■□□ 2.07
CHD1LQ86WJ1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CHD1LQ86WJ1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CHD1LQ86WJ1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CHD1LQ86WJ1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CHD1LQ86WJ1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CHD1LQ86WJ1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms