Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRTM4Q86VH4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LRRTM4Q86VH4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LRRTM4Q86VH4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRTM4Q86VH4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
LRRTM4Q86VH4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.31■■□□□ 1.16
LRRTM4Q86VH4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRTM4Q86VH4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LRRTM4Q86VH4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRTM4Q86VH4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LRRTM4Q86VH4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
LRRTM4Q86VH4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.3■■□□□ 1.16
LRRTM4Q86VH4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
LRRTM4Q86VH4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LRRTM4Q86VH4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM4Q86VH4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM4Q86VH4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.29■■□□□ 1.16
LRRTM4Q86VH4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM4Q86VH4 AC009102.2-201ENST00000606772 1639 ntBASIC22.29■■□□□ 1.16
LRRTM4Q86VH4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM4Q86VH4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM4Q86VH4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.29■■□□□ 1.16
LRRTM4Q86VH4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM4Q86VH4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM4Q86VH4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.29■■□□□ 1.16
LRRTM4Q86VH4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
LRRTM4Q86VH4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.29■■□□□ 1.16
LRRTM4Q86VH4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.29■■□□□ 1.16
LRRTM4Q86VH4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRTM4Q86VH4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.28■■□□□ 1.16
LRRTM4Q86VH4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LRRTM4Q86VH4 SRD5A1P1-201ENST00000442297 786 ntBASIC22.28■■□□□ 1.16
LRRTM4Q86VH4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
LRRTM4Q86VH4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRTM4Q86VH4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.28■■□□□ 1.16
LRRTM4Q86VH4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRTM4Q86VH4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRTM4Q86VH4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.27■■□□□ 1.16
LRRTM4Q86VH4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.27■■□□□ 1.16
LRRTM4Q86VH4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRTM4Q86VH4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LRRTM4Q86VH4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
LRRTM4Q86VH4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.26■■□□□ 1.15
LRRTM4Q86VH4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRTM4Q86VH4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.26■■□□□ 1.15
LRRTM4Q86VH4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.26■■□□□ 1.15
LRRTM4Q86VH4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.26■■□□□ 1.15
LRRTM4Q86VH4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.26■■□□□ 1.15
LRRTM4Q86VH4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRTM4Q86VH4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
LRRTM4Q86VH4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.25■■□□□ 1.15
LRRTM4Q86VH4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LRRTM4Q86VH4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRTM4Q86VH4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
LRRTM4Q86VH4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRTM4Q86VH4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRTM4Q86VH4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRTM4Q86VH4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
LRRTM4Q86VH4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
LRRTM4Q86VH4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRTM4Q86VH4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
LRRTM4Q86VH4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRTM4Q86VH4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LRRTM4Q86VH4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRTM4Q86VH4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRTM4Q86VH4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRTM4Q86VH4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LRRTM4Q86VH4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRRTM4Q86VH4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
LRRTM4Q86VH4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRRTM4Q86VH4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRRTM4Q86VH4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRRTM4Q86VH4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRRTM4Q86VH4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.23■■□□□ 1.15
LRRTM4Q86VH4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.23■■□□□ 1.15
LRRTM4Q86VH4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.23■■□□□ 1.15
LRRTM4Q86VH4 ABCB10P4-201ENST00000566803 2184 ntBASIC22.23■■□□□ 1.15
LRRTM4Q86VH4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.23■■□□□ 1.15
LRRTM4Q86VH4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRRTM4Q86VH4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.23■■□□□ 1.15
LRRTM4Q86VH4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRRTM4Q86VH4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LRRTM4Q86VH4 C17orf82-201ENST00000623772 1530 ntBASIC22.22■■□□□ 1.15
LRRTM4Q86VH4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LRRTM4Q86VH4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LRRTM4Q86VH4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.22■■□□□ 1.15
LRRTM4Q86VH4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.22■■□□□ 1.15
LRRTM4Q86VH4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
LRRTM4Q86VH4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
LRRTM4Q86VH4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.21■■□□□ 1.15
LRRTM4Q86VH4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
LRRTM4Q86VH4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
LRRTM4Q86VH4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LRRTM4Q86VH4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LRRTM4Q86VH4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
LRRTM4Q86VH4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.21■■□□□ 1.15
LRRTM4Q86VH4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
LRRTM4Q86VH4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.2■■□□□ 1.14
LRRTM4Q86VH4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LRRTM4Q86VH4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms