Protein–RNA interactions for Protein: Q7RTT4

SSX8, Protein SSX8, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8Q7RTT4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.67■□□□□ 0.74
SSX8Q7RTT4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSX8Q7RTT4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSX8Q7RTT4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSX8Q7RTT4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.66■□□□□ 0.74
SSX8Q7RTT4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSX8Q7RTT4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.65■□□□□ 0.74
SSX8Q7RTT4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSX8Q7RTT4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSX8Q7RTT4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.65■□□□□ 0.74
SSX8Q7RTT4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.65■□□□□ 0.74
SSX8Q7RTT4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSX8Q7RTT4 AC099791.2-201ENST00000605725 427 ntBASIC19.65■□□□□ 0.74
SSX8Q7RTT4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.65■□□□□ 0.74
SSX8Q7RTT4 FP325331.1-202ENST00000623531 1380 ntBASIC19.65■□□□□ 0.74
SSX8Q7RTT4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSX8Q7RTT4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SSX8Q7RTT4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSX8Q7RTT4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSX8Q7RTT4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSX8Q7RTT4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.64■□□□□ 0.73
SSX8Q7RTT4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.64■□□□□ 0.73
SSX8Q7RTT4 AC024257.2-201ENST00000549699 147 ntBASIC19.64■□□□□ 0.73
SSX8Q7RTT4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SSX8Q7RTT4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSX8Q7RTT4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSX8Q7RTT4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SSX8Q7RTT4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.64■□□□□ 0.73
SSX8Q7RTT4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX8Q7RTT4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX8Q7RTT4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.63■□□□□ 0.73
SSX8Q7RTT4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SSX8Q7RTT4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX8Q7RTT4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX8Q7RTT4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.63■□□□□ 0.73
SSX8Q7RTT4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SSX8Q7RTT4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
SSX8Q7RTT4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX8Q7RTT4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX8Q7RTT4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.63■□□□□ 0.73
SSX8Q7RTT4 AC142381.2-201ENST00000566120 298 ntBASIC19.63■□□□□ 0.73
SSX8Q7RTT4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.63■□□□□ 0.73
SSX8Q7RTT4 AC009086.3-201ENST00000623486 1008 ntBASIC19.63■□□□□ 0.73
SSX8Q7RTT4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.63■□□□□ 0.73
SSX8Q7RTT4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SSX8Q7RTT4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSX8Q7RTT4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.63■□□□□ 0.73
SSX8Q7RTT4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.62■□□□□ 0.73
SSX8Q7RTT4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX8Q7RTT4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SSX8Q7RTT4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX8Q7RTT4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSX8Q7RTT4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.62■□□□□ 0.73
SSX8Q7RTT4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.62■□□□□ 0.73
SSX8Q7RTT4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.62■□□□□ 0.73
SSX8Q7RTT4 AC136469.2-201ENST00000623944 1028 ntBASIC19.62■□□□□ 0.73
SSX8Q7RTT4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSX8Q7RTT4 AC138932.3-201ENST00000567634 1902 ntBASIC19.62■□□□□ 0.73
SSX8Q7RTT4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSX8Q7RTT4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSX8Q7RTT4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSX8Q7RTT4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSX8Q7RTT4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSX8Q7RTT4 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.61■□□□□ 0.73
SSX8Q7RTT4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSX8Q7RTT4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SSX8Q7RTT4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX8Q7RTT4 SERBP1P1-201ENST00000396021 1160 ntBASIC19.6■□□□□ 0.73
SSX8Q7RTT4 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.6■□□□□ 0.73
SSX8Q7RTT4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.6■□□□□ 0.73
SSX8Q7RTT4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
SSX8Q7RTT4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.6■□□□□ 0.73
SSX8Q7RTT4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.6■□□□□ 0.73
SSX8Q7RTT4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SSX8Q7RTT4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.6■□□□□ 0.73
SSX8Q7RTT4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSX8Q7RTT4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSX8Q7RTT4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.59■□□□□ 0.73
SSX8Q7RTT4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSX8Q7RTT4 AC091305.1-201ENST00000479476 895 ntBASIC19.59■□□□□ 0.73
SSX8Q7RTT4 SUDS3P1-201ENST00000505831 966 ntBASIC19.59■□□□□ 0.73
SSX8Q7RTT4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.59■□□□□ 0.73
SSX8Q7RTT4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.59■□□□□ 0.73
SSX8Q7RTT4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSX8Q7RTT4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSX8Q7RTT4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSX8Q7RTT4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSX8Q7RTT4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSX8Q7RTT4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSX8Q7RTT4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.58■□□□□ 0.72
SSX8Q7RTT4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSX8Q7RTT4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSX8Q7RTT4 LINC00543-201ENST00000567234 1845 ntBASIC19.58■□□□□ 0.72
SSX8Q7RTT4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSX8Q7RTT4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSX8Q7RTT4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.57■□□□□ 0.72
SSX8Q7RTT4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSX8Q7RTT4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
SSX8Q7RTT4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms