Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LCA10Q71F78 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LCA10Q71F78 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LCA10Q71F78 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LCA10Q71F78 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LCA10Q71F78 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LCA10Q71F78 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC12.12□□□□□ -0.47
LCA10Q71F78 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LCA10Q71F78 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC12.12□□□□□ -0.47
LCA10Q71F78 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LCA10Q71F78 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LCA10Q71F78 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC12.12□□□□□ -0.47
LCA10Q71F78 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LCA10Q71F78 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LCA10Q71F78 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC12.12□□□□□ -0.47
LCA10Q71F78 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
LCA10Q71F78 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LCA10Q71F78 LINC00526-201ENST00000581067 1875 ntBASIC12.12□□□□□ -0.47
LCA10Q71F78 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LCA10Q71F78 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.12□□□□□ -0.47
LCA10Q71F78 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.12□□□□□ -0.47
LCA10Q71F78 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.12□□□□□ -0.47
LCA10Q71F78 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC12.12□□□□□ -0.47
LCA10Q71F78 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LCA10Q71F78 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LCA10Q71F78 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LCA10Q71F78 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LCA10Q71F78 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
LCA10Q71F78 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LCA10Q71F78 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC12.11□□□□□ -0.47
LCA10Q71F78 AC022211.4-201ENST00000625094 2161 ntBASIC12.11□□□□□ -0.47
LCA10Q71F78 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LCA10Q71F78 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LCA10Q71F78 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LCA10Q71F78 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LCA10Q71F78 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LCA10Q71F78 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC12.11□□□□□ -0.47
LCA10Q71F78 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LCA10Q71F78 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC12.11□□□□□ -0.47
LCA10Q71F78 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LCA10Q71F78 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LCA10Q71F78 NRG1-221ENST00000614767 762 ntTSL 5 BASIC12.11□□□□□ -0.47
LCA10Q71F78 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LCA10Q71F78 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LCA10Q71F78 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LCA10Q71F78 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LCA10Q71F78 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LCA10Q71F78 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LCA10Q71F78 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LCA10Q71F78 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LCA10Q71F78 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
LCA10Q71F78 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC12.1□□□□□ -0.47
LCA10Q71F78 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LCA10Q71F78 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LCA10Q71F78 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC12.1□□□□□ -0.47
LCA10Q71F78 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LCA10Q71F78 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LCA10Q71F78 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LCA10Q71F78 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LCA10Q71F78 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LCA10Q71F78 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LCA10Q71F78 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LCA10Q71F78 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LCA10Q71F78 AL162393.1-201ENST00000437852 946 ntBASIC12.1□□□□□ -0.47
LCA10Q71F78 BOD1-206ENST00000480951 814 ntTSL 2 BASIC12.1□□□□□ -0.47
LCA10Q71F78 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LCA10Q71F78 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC12.1□□□□□ -0.47
LCA10Q71F78 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LCA10Q71F78 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LCA10Q71F78 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC12.1□□□□□ -0.47
LCA10Q71F78 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC12.1□□□□□ -0.47
LCA10Q71F78 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
LCA10Q71F78 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
LCA10Q71F78 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LCA10Q71F78 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC12.09□□□□□ -0.47
LCA10Q71F78 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LCA10Q71F78 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
LCA10Q71F78 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LCA10Q71F78 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LCA10Q71F78 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
LCA10Q71F78 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LCA10Q71F78 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC12.09□□□□□ -0.47
LCA10Q71F78 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LCA10Q71F78 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LCA10Q71F78 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LCA10Q71F78 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC12.09□□□□□ -0.47
LCA10Q71F78 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LCA10Q71F78 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LCA10Q71F78 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LCA10Q71F78 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LCA10Q71F78 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
LCA10Q71F78 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LCA10Q71F78 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC12.08□□□□□ -0.48
LCA10Q71F78 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LCA10Q71F78 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LCA10Q71F78 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC12.08□□□□□ -0.48
LCA10Q71F78 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC12.08□□□□□ -0.48
LCA10Q71F78 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LCA10Q71F78 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LCA10Q71F78 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms