Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
FOXR1Q6PIV2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
FOXR1Q6PIV2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
FOXR1Q6PIV2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
FOXR1Q6PIV2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.49■■□□□ 1.35
FOXR1Q6PIV2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
FOXR1Q6PIV2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.49■■□□□ 1.35
FOXR1Q6PIV2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
FOXR1Q6PIV2 THA1P-201ENST00000590384 1145 ntBASIC23.49■■□□□ 1.35
FOXR1Q6PIV2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
FOXR1Q6PIV2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.49■■□□□ 1.35
FOXR1Q6PIV2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.49■■□□□ 1.35
FOXR1Q6PIV2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
FOXR1Q6PIV2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
FOXR1Q6PIV2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
FOXR1Q6PIV2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.49■■□□□ 1.35
FOXR1Q6PIV2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.49■■□□□ 1.35
FOXR1Q6PIV2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.48■■□□□ 1.35
FOXR1Q6PIV2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
FOXR1Q6PIV2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
FOXR1Q6PIV2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
FOXR1Q6PIV2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
FOXR1Q6PIV2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
FOXR1Q6PIV2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.48■■□□□ 1.35
FOXR1Q6PIV2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
FOXR1Q6PIV2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
FOXR1Q6PIV2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
FOXR1Q6PIV2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
FOXR1Q6PIV2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
FOXR1Q6PIV2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
FOXR1Q6PIV2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
FOXR1Q6PIV2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
FOXR1Q6PIV2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
FOXR1Q6PIV2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
FOXR1Q6PIV2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
FOXR1Q6PIV2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
FOXR1Q6PIV2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
FOXR1Q6PIV2 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.46■■□□□ 1.35
FOXR1Q6PIV2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
FOXR1Q6PIV2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
FOXR1Q6PIV2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.46■■□□□ 1.35
FOXR1Q6PIV2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.46■■□□□ 1.35
FOXR1Q6PIV2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
FOXR1Q6PIV2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
FOXR1Q6PIV2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
FOXR1Q6PIV2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
FOXR1Q6PIV2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
FOXR1Q6PIV2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
FOXR1Q6PIV2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.45■■□□□ 1.34
FOXR1Q6PIV2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
FOXR1Q6PIV2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.45■■□□□ 1.34
FOXR1Q6PIV2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
FOXR1Q6PIV2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.45■■□□□ 1.34
FOXR1Q6PIV2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.45■■□□□ 1.34
FOXR1Q6PIV2 MIR4508-201ENST00000584178 70 ntBASIC23.45■■□□□ 1.34
FOXR1Q6PIV2 AL031848.2-201ENST00000607670 837 ntBASIC23.45■■□□□ 1.34
FOXR1Q6PIV2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
FOXR1Q6PIV2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.34
FOXR1Q6PIV2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
FOXR1Q6PIV2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
FOXR1Q6PIV2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
FOXR1Q6PIV2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.44■■□□□ 1.34
FOXR1Q6PIV2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
FOXR1Q6PIV2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
FOXR1Q6PIV2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
FOXR1Q6PIV2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.44■■□□□ 1.34
FOXR1Q6PIV2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
FOXR1Q6PIV2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
FOXR1Q6PIV2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
FOXR1Q6PIV2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
FOXR1Q6PIV2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
FOXR1Q6PIV2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
FOXR1Q6PIV2 AC127496.7-201ENST00000625110 1798 ntBASIC23.43■■□□□ 1.34
FOXR1Q6PIV2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
FOXR1Q6PIV2 GUSBP5-201ENST00000418136 578 ntBASIC23.43■■□□□ 1.34
FOXR1Q6PIV2 AC103724.3-201ENST00000564481 992 ntBASIC23.43■■□□□ 1.34
FOXR1Q6PIV2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
FOXR1Q6PIV2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
FOXR1Q6PIV2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
FOXR1Q6PIV2 FOXO3B-201ENST00000395675 1928 ntBASIC23.43■■□□□ 1.34
FOXR1Q6PIV2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.43■■□□□ 1.34
FOXR1Q6PIV2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
FOXR1Q6PIV2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
FOXR1Q6PIV2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
FOXR1Q6PIV2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
FOXR1Q6PIV2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
FOXR1Q6PIV2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
FOXR1Q6PIV2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
FOXR1Q6PIV2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
FOXR1Q6PIV2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
FOXR1Q6PIV2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.42■■□□□ 1.34
FOXR1Q6PIV2 GUSBP5-202ENST00000510805 1989 ntBASIC23.41■■□□□ 1.34
FOXR1Q6PIV2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
FOXR1Q6PIV2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
FOXR1Q6PIV2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
FOXR1Q6PIV2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
FOXR1Q6PIV2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
FOXR1Q6PIV2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
FOXR1Q6PIV2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
FOXR1Q6PIV2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms