Protein–RNA interactions for Protein: Q4LDE5

SVEP1, Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1, humanhuman

Predictions only

Length 3,571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVEP1Q4LDE5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SVEP1Q4LDE5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SVEP1Q4LDE5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.7■□□□□ 0.58
SVEP1Q4LDE5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SVEP1Q4LDE5 AC011298.3-201ENST00000615796 283 ntBASIC18.7■□□□□ 0.58
SVEP1Q4LDE5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SVEP1Q4LDE5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SVEP1Q4LDE5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SVEP1Q4LDE5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SVEP1Q4LDE5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.69■□□□□ 0.58
SVEP1Q4LDE5 AC233992.3-201ENST00000607491 485 ntBASIC18.69■□□□□ 0.58
SVEP1Q4LDE5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SVEP1Q4LDE5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SVEP1Q4LDE5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SVEP1Q4LDE5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.69■□□□□ 0.58
SVEP1Q4LDE5 YBX1P1-201ENST00000445822 960 ntBASIC18.69■□□□□ 0.58
SVEP1Q4LDE5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
SVEP1Q4LDE5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SVEP1Q4LDE5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SVEP1Q4LDE5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.68■□□□□ 0.58
SVEP1Q4LDE5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SVEP1Q4LDE5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SVEP1Q4LDE5 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SVEP1Q4LDE5 AC006455.2-201ENST00000429931 906 ntBASIC18.68■□□□□ 0.58
SVEP1Q4LDE5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.68■□□□□ 0.58
SVEP1Q4LDE5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SVEP1Q4LDE5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.68■□□□□ 0.58
SVEP1Q4LDE5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SVEP1Q4LDE5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SVEP1Q4LDE5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SVEP1Q4LDE5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SVEP1Q4LDE5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SVEP1Q4LDE5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SVEP1Q4LDE5 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SVEP1Q4LDE5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SVEP1Q4LDE5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SVEP1Q4LDE5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.67■□□□□ 0.58
SVEP1Q4LDE5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.67■□□□□ 0.58
SVEP1Q4LDE5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SVEP1Q4LDE5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SVEP1Q4LDE5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.67■□□□□ 0.58
SVEP1Q4LDE5 AC099791.2-201ENST00000605725 427 ntBASIC18.67■□□□□ 0.58
SVEP1Q4LDE5 AC136469.2-201ENST00000623944 1028 ntBASIC18.67■□□□□ 0.58
SVEP1Q4LDE5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SVEP1Q4LDE5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.67■□□□□ 0.58
SVEP1Q4LDE5 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SVEP1Q4LDE5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.67■□□□□ 0.58
SVEP1Q4LDE5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SVEP1Q4LDE5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SVEP1Q4LDE5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.66■□□□□ 0.58
SVEP1Q4LDE5 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SVEP1Q4LDE5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.66■□□□□ 0.58
SVEP1Q4LDE5 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SVEP1Q4LDE5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.66■□□□□ 0.58
SVEP1Q4LDE5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SVEP1Q4LDE5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SVEP1Q4LDE5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.66■□□□□ 0.58
SVEP1Q4LDE5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SVEP1Q4LDE5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SVEP1Q4LDE5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SVEP1Q4LDE5 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SVEP1Q4LDE5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SVEP1Q4LDE5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SVEP1Q4LDE5 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SVEP1Q4LDE5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SVEP1Q4LDE5 AC099791.1-201ENST00000416440 715 ntBASIC18.65■□□□□ 0.58
SVEP1Q4LDE5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.65■□□□□ 0.58
SVEP1Q4LDE5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SVEP1Q4LDE5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.65■□□□□ 0.58
SVEP1Q4LDE5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SVEP1Q4LDE5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SVEP1Q4LDE5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SVEP1Q4LDE5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.65■□□□□ 0.58
SVEP1Q4LDE5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SVEP1Q4LDE5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SVEP1Q4LDE5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.65■□□□□ 0.58
SVEP1Q4LDE5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SVEP1Q4LDE5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.64■□□□□ 0.58
SVEP1Q4LDE5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SVEP1Q4LDE5 DUSP8P4-201ENST00000399538 1761 ntBASIC18.64■□□□□ 0.57
SVEP1Q4LDE5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.64■□□□□ 0.57
SVEP1Q4LDE5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.64■□□□□ 0.57
SVEP1Q4LDE5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SVEP1Q4LDE5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SVEP1Q4LDE5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
SVEP1Q4LDE5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.64■□□□□ 0.57
SVEP1Q4LDE5 AC034268.1-201ENST00000441047 882 ntBASIC18.64■□□□□ 0.57
SVEP1Q4LDE5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.64■□□□□ 0.57
SVEP1Q4LDE5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SVEP1Q4LDE5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SVEP1Q4LDE5 AL138724.1-201ENST00000606771 1088 ntBASIC18.63■□□□□ 0.57
SVEP1Q4LDE5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SVEP1Q4LDE5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SVEP1Q4LDE5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SVEP1Q4LDE5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.63■□□□□ 0.57
SVEP1Q4LDE5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.63■□□□□ 0.57
SVEP1Q4LDE5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SVEP1Q4LDE5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SVEP1Q4LDE5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
SVEP1Q4LDE5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms