Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL20P78556 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL20P78556 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.87■□□□□ 0.45
CCL20P78556 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL20P78556 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCL20P78556 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL20P78556 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.87■□□□□ 0.45
CCL20P78556 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL20P78556 AL121603.2-201ENST00000557373 2117 ntBASIC17.87■□□□□ 0.45
CCL20P78556 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCL20P78556 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL20P78556 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.87■□□□□ 0.45
CCL20P78556 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL20P78556 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCL20P78556 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL20P78556 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL20P78556 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.86■□□□□ 0.45
CCL20P78556 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.86■□□□□ 0.45
CCL20P78556 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL20P78556 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL20P78556 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL20P78556 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL20P78556 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCL20P78556 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL20P78556 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.86■□□□□ 0.45
CCL20P78556 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCL20P78556 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL20P78556 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL20P78556 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCL20P78556 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL20P78556 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL20P78556 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCL20P78556 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL20P78556 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.85■□□□□ 0.45
CCL20P78556 C11orf96-202ENST00000528572 1834 ntBASIC17.85■□□□□ 0.45
CCL20P78556 AC008813.1-201ENST00000536597 885 ntBASIC17.85■□□□□ 0.45
CCL20P78556 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.85■□□□□ 0.45
CCL20P78556 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.85■□□□□ 0.45
CCL20P78556 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL20P78556 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCL20P78556 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CCL20P78556 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCL20P78556 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCL20P78556 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCL20P78556 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL20P78556 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.84■□□□□ 0.45
CCL20P78556 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCL20P78556 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL20P78556 ESRRAP2-201ENST00000418437 1549 ntBASIC17.84■□□□□ 0.45
CCL20P78556 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCL20P78556 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.84■□□□□ 0.45
CCL20P78556 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL20P78556 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCL20P78556 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.84■□□□□ 0.45
CCL20P78556 AC021231.2-201ENST00000594613 730 ntBASIC17.84■□□□□ 0.45
CCL20P78556 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCL20P78556 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCL20P78556 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.84■□□□□ 0.45
CCL20P78556 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL20P78556 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL20P78556 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCL20P78556 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCL20P78556 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCL20P78556 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.83■□□□□ 0.45
CCL20P78556 AC026310.3-201ENST00000625186 2373 ntBASIC17.83■□□□□ 0.45
CCL20P78556 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.83■□□□□ 0.44
CCL20P78556 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCL20P78556 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCL20P78556 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCL20P78556 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCL20P78556 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCL20P78556 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCL20P78556 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCL20P78556 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.83■□□□□ 0.44
CCL20P78556 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.82■□□□□ 0.44
CCL20P78556 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.82■□□□□ 0.44
CCL20P78556 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCL20P78556 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.82■□□□□ 0.44
CCL20P78556 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CCL20P78556 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.82■□□□□ 0.44
CCL20P78556 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCL20P78556 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCL20P78556 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCL20P78556 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCL20P78556 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.82■□□□□ 0.44
CCL20P78556 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCL20P78556 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCL20P78556 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCL20P78556 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.81■□□□□ 0.44
CCL20P78556 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.81■□□□□ 0.44
CCL20P78556 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCL20P78556 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.81■□□□□ 0.44
CCL20P78556 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCL20P78556 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.81■□□□□ 0.44
CCL20P78556 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCL20P78556 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCL20P78556 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCL20P78556 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.81■□□□□ 0.44
CCL20P78556 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCL20P78556 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms