Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 AL592293.1-201ENST00000502889 1188 ntBASIC19.46■□□□□ 0.71
RPS27AP62979 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS27AP62979 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
RPS27AP62979 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.46■□□□□ 0.71
RPS27AP62979 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS27AP62979 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS27AP62979 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPS27AP62979 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.45■□□□□ 0.7
RPS27AP62979 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS27AP62979 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS27AP62979 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.45■□□□□ 0.7
RPS27AP62979 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.45■□□□□ 0.7
RPS27AP62979 DUSP8P3-201ENST00000399571 1760 ntBASIC19.45■□□□□ 0.7
RPS27AP62979 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RPS27AP62979 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RPS27AP62979 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS27AP62979 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.45■□□□□ 0.7
RPS27AP62979 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS27AP62979 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS27AP62979 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RPS27AP62979 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS27AP62979 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RPS27AP62979 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RPS27AP62979 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS27AP62979 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS27AP62979 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS27AP62979 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS27AP62979 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPS27AP62979 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPS27AP62979 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.44■□□□□ 0.7
RPS27AP62979 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS27AP62979 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.44■□□□□ 0.7
RPS27AP62979 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.44■□□□□ 0.7
RPS27AP62979 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPS27AP62979 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.44■□□□□ 0.7
RPS27AP62979 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPS27AP62979 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS27AP62979 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.44■□□□□ 0.7
RPS27AP62979 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.44■□□□□ 0.7
RPS27AP62979 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS27AP62979 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RPS27AP62979 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RPS27AP62979 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS27AP62979 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPS27AP62979 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS27AP62979 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.43■□□□□ 0.7
RPS27AP62979 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS27AP62979 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS27AP62979 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.43■□□□□ 0.7
RPS27AP62979 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPS27AP62979 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS27AP62979 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS27AP62979 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RPS27AP62979 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS27AP62979 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS27AP62979 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.42■□□□□ 0.7
RPS27AP62979 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.42■□□□□ 0.7
RPS27AP62979 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPS27AP62979 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.42■□□□□ 0.7
RPS27AP62979 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS27AP62979 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.42■□□□□ 0.7
RPS27AP62979 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS27AP62979 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS27AP62979 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS27AP62979 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS27AP62979 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS27AP62979 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS27AP62979 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS27AP62979 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS27AP62979 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPS27AP62979 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS27AP62979 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RPS27AP62979 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPS27AP62979 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPS27AP62979 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
RPS27AP62979 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.41■□□□□ 0.7
RPS27AP62979 MIR6765-201ENST00000614092 87 ntBASIC19.41■□□□□ 0.7
RPS27AP62979 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPS27AP62979 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RPS27AP62979 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.41■□□□□ 0.7
RPS27AP62979 AL022069.1-201ENST00000568025 1636 ntBASIC19.4■□□□□ 0.7
RPS27AP62979 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RPS27AP62979 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.4■□□□□ 0.7
RPS27AP62979 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.4■□□□□ 0.7
RPS27AP62979 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS27AP62979 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS27AP62979 EP400NL-214ENST00000641289 2402 ntBASIC19.4■□□□□ 0.7
RPS27AP62979 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RPS27AP62979 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RPS27AP62979 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.39■□□□□ 0.7
RPS27AP62979 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RPS27AP62979 AC233723.2-201ENST00000623798 2106 ntBASIC19.39■□□□□ 0.69
RPS27AP62979 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RPS27AP62979 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.39■□□□□ 0.69
RPS27AP62979 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPS27AP62979 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RPS27AP62979 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPS27AP62979 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPS27AP62979 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPS27AP62979 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms