Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPS3AP61247 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPS3AP61247 BX664725.1-201ENST00000438252 379 ntBASIC21.08■□□□□ 0.97
RPS3AP61247 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.08■□□□□ 0.97
RPS3AP61247 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPS3AP61247 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.07■□□□□ 0.96
RPS3AP61247 AL121603.2-201ENST00000557373 2117 ntBASIC21.07■□□□□ 0.96
RPS3AP61247 AC141586.4-201ENST00000624558 1573 ntBASIC21.07■□□□□ 0.96
RPS3AP61247 Z92544.1-202ENST00000571933 1220 ntBASIC21.07■□□□□ 0.96
RPS3AP61247 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.07■□□□□ 0.96
RPS3AP61247 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RPS3AP61247 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPS3AP61247 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPS3AP61247 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RPS3AP61247 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RPS3AP61247 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS3AP61247 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPS3AP61247 C1orf229-201ENST00000623686 2258 ntBASIC21.06■□□□□ 0.96
RPS3AP61247 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS3AP61247 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPS3AP61247 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPS3AP61247 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS3AP61247 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPS3AP61247 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RPS3AP61247 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPS3AP61247 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPS3AP61247 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPS3AP61247 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPS3AP61247 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPS3AP61247 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPS3AP61247 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RPS3AP61247 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RPS3AP61247 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.05■□□□□ 0.96
RPS3AP61247 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
RPS3AP61247 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPS3AP61247 KRT125P-201ENST00000546827 989 ntBASIC21.05■□□□□ 0.96
RPS3AP61247 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.05■□□□□ 0.96
RPS3AP61247 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPS3AP61247 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPS3AP61247 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RPS3AP61247 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS3AP61247 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS3AP61247 MIR4281-201ENST00000580852 62 ntBASIC21.04■□□□□ 0.96
RPS3AP61247 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS3AP61247 ABCB10P4-201ENST00000566803 2184 ntBASIC21.04■□□□□ 0.96
RPS3AP61247 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS3AP61247 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.04■□□□□ 0.96
RPS3AP61247 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS3AP61247 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.04■□□□□ 0.96
RPS3AP61247 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPS3AP61247 AC090877.2-201ENST00000558441 1738 ntBASIC21.04■□□□□ 0.96
RPS3AP61247 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RPS3AP61247 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RPS3AP61247 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPS3AP61247 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.03■□□□□ 0.96
RPS3AP61247 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.03■□□□□ 0.96
RPS3AP61247 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPS3AP61247 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPS3AP61247 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.03■□□□□ 0.96
RPS3AP61247 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.03■□□□□ 0.96
RPS3AP61247 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPS3AP61247 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.03■□□□□ 0.96
RPS3AP61247 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
RPS3AP61247 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RPS3AP61247 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RPS3AP61247 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPS3AP61247 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.02■□□□□ 0.96
RPS3AP61247 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.02■□□□□ 0.96
RPS3AP61247 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPS3AP61247 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPS3AP61247 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPS3AP61247 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPS3AP61247 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.02■□□□□ 0.96
RPS3AP61247 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.02■□□□□ 0.96
RPS3AP61247 AC137630.3-201ENST00000607245 391 ntBASIC21.02■□□□□ 0.96
RPS3AP61247 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.02■□□□□ 0.96
RPS3AP61247 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPS3AP61247 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPS3AP61247 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RPS3AP61247 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.02■□□□□ 0.95
RPS3AP61247 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RPS3AP61247 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.02■□□□□ 0.95
RPS3AP61247 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.01■□□□□ 0.95
RPS3AP61247 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPS3AP61247 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPS3AP61247 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPS3AP61247 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPS3AP61247 AC239859.2-201ENST00000444165 318 ntBASIC21.01■□□□□ 0.95
RPS3AP61247 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPS3AP61247 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPS3AP61247 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.01■□□□□ 0.95
RPS3AP61247 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RPS3AP61247 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RPS3AP61247 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPS3AP61247 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPS3AP61247 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPS3AP61247 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPS3AP61247 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPS3AP61247 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPS3AP61247 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms